Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.2■□□□□ 0.18
USP46P62068 AC104989.1-201ENST00000519711 778 ntBASIC16.2■□□□□ 0.18
USP46P62068 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.2■□□□□ 0.18
USP46P62068 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.2■□□□□ 0.18
USP46P62068 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.2■□□□□ 0.18
USP46P62068 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.2■□□□□ 0.18
USP46P62068 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
USP46P62068 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.2■□□□□ 0.18
USP46P62068 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.2■□□□□ 0.18
USP46P62068 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
USP46P62068 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.2■□□□□ 0.18
USP46P62068 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
USP46P62068 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
USP46P62068 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.2■□□□□ 0.18
USP46P62068 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
USP46P62068 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.2■□□□□ 0.18
USP46P62068 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
USP46P62068 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
USP46P62068 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
USP46P62068 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
USP46P62068 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
USP46P62068 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
USP46P62068 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.19■□□□□ 0.18
USP46P62068 AC090616.6-203ENST00000579186 1945 ntBASIC16.19■□□□□ 0.18
USP46P62068 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.19■□□□□ 0.18
USP46P62068 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.19■□□□□ 0.18
USP46P62068 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.19■□□□□ 0.18
USP46P62068 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 BOLA2P3-201ENST00000404566 256 ntBASIC16.19■□□□□ 0.18
USP46P62068 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.19■□□□□ 0.18
USP46P62068 KRT223P-202ENST00000449164 1292 ntBASIC16.19■□□□□ 0.18
USP46P62068 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
USP46P62068 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.19■□□□□ 0.18
USP46P62068 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.19■□□□□ 0.18
USP46P62068 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.19■□□□□ 0.18
USP46P62068 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.19■□□□□ 0.18
USP46P62068 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.19■□□□□ 0.18
USP46P62068 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.19■□□□□ 0.18
USP46P62068 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.19■□□□□ 0.18
USP46P62068 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
USP46P62068 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
USP46P62068 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.19■□□□□ 0.18
USP46P62068 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.19■□□□□ 0.18
USP46P62068 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.19■□□□□ 0.18
USP46P62068 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
USP46P62068 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
USP46P62068 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
USP46P62068 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
USP46P62068 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
USP46P62068 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.18■□□□□ 0.18
USP46P62068 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.18■□□□□ 0.18
USP46P62068 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 AC126177.1-201ENST00000547829 2218 ntBASIC16.18■□□□□ 0.18
USP46P62068 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.18■□□□□ 0.18
USP46P62068 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.18■□□□□ 0.18
USP46P62068 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP46P62068 RPS2P32-201ENST00000439199 892 ntBASIC16.18■□□□□ 0.18
USP46P62068 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.18■□□□□ 0.18
USP46P62068 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.18■□□□□ 0.18
USP46P62068 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.18■□□□□ 0.18
USP46P62068 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.18■□□□□ 0.18
USP46P62068 AC007551.1-201ENST00000457394 519 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms