Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.27□□□□□ -0.29
AP3S2P59780 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S2P59780 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S2P59780 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
AP3S2P59780 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
AP3S2P59780 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S2P59780 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
AP3S2P59780 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S2P59780 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S2P59780 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
AP3S2P59780 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
AP3S2P59780 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S2P59780 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S2P59780 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
AP3S2P59780 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
AP3S2P59780 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.26□□□□□ -0.29
AP3S2P59780 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S2P59780 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S2P59780 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.26□□□□□ -0.29
AP3S2P59780 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.26□□□□□ -0.29
AP3S2P59780 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S2P59780 AC138969.3-201ENST00000546612 1459 ntBASIC13.26□□□□□ -0.29
AP3S2P59780 AC138932.2-201ENST00000548268 1459 ntBASIC13.26□□□□□ -0.29
AP3S2P59780 AC126755.4-201ENST00000549796 1459 ntBASIC13.26□□□□□ -0.29
AP3S2P59780 AC084364.1-201ENST00000551967 1556 ntBASIC13.26□□□□□ -0.29
AP3S2P59780 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.26□□□□□ -0.29
AP3S2P59780 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S2P59780 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S2P59780 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
AP3S2P59780 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S2P59780 MIR1199-201ENST00000621445 119 ntBASIC13.26□□□□□ -0.29
AP3S2P59780 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S2P59780 AC055811.4-201ENST00000624039 1754 ntBASIC13.26□□□□□ -0.29
AP3S2P59780 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
AP3S2P59780 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S2P59780 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.26□□□□□ -0.29
AP3S2P59780 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S2P59780 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
AP3S2P59780 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
AP3S2P59780 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 CICP8-201ENST00000455800 2813 ntBASIC13.25□□□□□ -0.29
AP3S2P59780 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
AP3S2P59780 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.25□□□□□ -0.29
AP3S2P59780 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
AP3S2P59780 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.25□□□□□ -0.29
AP3S2P59780 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S2P59780 TPT1P11-201ENST00000458482 498 ntBASIC13.25□□□□□ -0.29
AP3S2P59780 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.25□□□□□ -0.29
AP3S2P59780 CXCL1P1-201ENST00000502804 216 ntBASIC13.25□□□□□ -0.29
AP3S2P59780 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
AP3S2P59780 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms