Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 AC126365.1-201ENST00000578585 1514 ntBASIC17.93■□□□□ 0.46
RHBDL3P58872 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.93■□□□□ 0.46
RHBDL3P58872 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.93■□□□□ 0.46
RHBDL3P58872 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.93■□□□□ 0.46
RHBDL3P58872 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.93■□□□□ 0.46
RHBDL3P58872 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.93■□□□□ 0.46
RHBDL3P58872 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.93■□□□□ 0.46
RHBDL3P58872 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.93■□□□□ 0.46
RHBDL3P58872 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.93■□□□□ 0.46
RHBDL3P58872 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.93■□□□□ 0.46
RHBDL3P58872 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.93■□□□□ 0.46
RHBDL3P58872 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.93■□□□□ 0.46
RHBDL3P58872 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.93■□□□□ 0.46
RHBDL3P58872 AC009955.4-201ENST00000597192 544 ntBASIC17.93■□□□□ 0.46
RHBDL3P58872 AC002472.3-201ENST00000640124 621 ntBASIC17.93■□□□□ 0.46
RHBDL3P58872 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RHBDL3P58872 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.93■□□□□ 0.46
RHBDL3P58872 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RHBDL3P58872 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.93■□□□□ 0.46
RHBDL3P58872 TMBIM7P-203ENST00000641617 1718 ntBASIC17.92■□□□□ 0.46
RHBDL3P58872 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.92■□□□□ 0.46
RHBDL3P58872 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.92■□□□□ 0.46
RHBDL3P58872 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RHBDL3P58872 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.92■□□□□ 0.46
RHBDL3P58872 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.92■□□□□ 0.46
RHBDL3P58872 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.92■□□□□ 0.46
RHBDL3P58872 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.92■□□□□ 0.46
RHBDL3P58872 AL162426.1-201ENST00000624141 743 ntBASIC17.92■□□□□ 0.46
RHBDL3P58872 AC068587.10-201ENST00000641210 219 ntBASIC17.92■□□□□ 0.46
RHBDL3P58872 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.92■□□□□ 0.46
RHBDL3P58872 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.92■□□□□ 0.46
RHBDL3P58872 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RHBDL3P58872 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RHBDL3P58872 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RHBDL3P58872 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RHBDL3P58872 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RHBDL3P58872 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.91■□□□□ 0.46
RHBDL3P58872 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.91■□□□□ 0.46
RHBDL3P58872 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RHBDL3P58872 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.91■□□□□ 0.46
RHBDL3P58872 DPM3-202ENST00000368399 517 ntBASIC17.91■□□□□ 0.46
RHBDL3P58872 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
RHBDL3P58872 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
RHBDL3P58872 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 AC010141.1-201ENST00000411585 623 ntBASIC17.91■□□□□ 0.46
RHBDL3P58872 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.91■□□□□ 0.46
RHBDL3P58872 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.91■□□□□ 0.46
RHBDL3P58872 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.91■□□□□ 0.46
RHBDL3P58872 AL136301.1-201ENST00000615830 422 ntBASIC17.91■□□□□ 0.46
RHBDL3P58872 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RHBDL3P58872 AC023090.2-201ENST00000625182 2110 ntBASIC17.91■□□□□ 0.46
RHBDL3P58872 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
RHBDL3P58872 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RHBDL3P58872 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RHBDL3P58872 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms