Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
EPHA4P54764 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.79□□□□□ -0.04
EPHA4P54764 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.79□□□□□ -0.04
EPHA4P54764 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.79□□□□□ -0.04
EPHA4P54764 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA4P54764 AHCYP2-201ENST00000430630 1300 ntBASIC14.79□□□□□ -0.04
EPHA4P54764 ACTBP11-201ENST00000436287 1126 ntBASIC14.79□□□□□ -0.04
EPHA4P54764 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.79□□□□□ -0.04
EPHA4P54764 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA4P54764 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EPHA4P54764 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 AC078819.1-201ENST00000547454 765 ntBASIC14.79□□□□□ -0.04
EPHA4P54764 AC012085.1-201ENST00000548270 765 ntBASIC14.79□□□□□ -0.04
EPHA4P54764 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.79□□□□□ -0.04
EPHA4P54764 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 FAM45BP-202ENST00000592932 1624 ntBASIC14.79□□□□□ -0.04
EPHA4P54764 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 AC148477.4-201ENST00000613430 1793 ntBASIC14.79□□□□□ -0.04
EPHA4P54764 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.79□□□□□ -0.04
EPHA4P54764 AC006453.4-201ENST00000636949 1252 ntBASIC14.79□□□□□ -0.04
EPHA4P54764 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.79□□□□□ -0.04
EPHA4P54764 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
EPHA4P54764 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
EPHA4P54764 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA4P54764 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
EPHA4P54764 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA4P54764 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
EPHA4P54764 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
EPHA4P54764 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EPHA4P54764 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA4P54764 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA4P54764 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA4P54764 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.78□□□□□ -0.04
EPHA4P54764 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
EPHA4P54764 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
EPHA4P54764 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.78□□□□□ -0.04
EPHA4P54764 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
EPHA4P54764 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.78□□□□□ -0.04
EPHA4P54764 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA4P54764 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.78□□□□□ -0.04
EPHA4P54764 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.78□□□□□ -0.04
EPHA4P54764 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.78□□□□□ -0.04
EPHA4P54764 AC092127.1-201ENST00000567093 3455 ntBASIC14.78□□□□□ -0.04
EPHA4P54764 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
EPHA4P54764 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
EPHA4P54764 TSPY26P-202ENST00000565928 3884 ntBASIC14.78□□□□□ -0.04
EPHA4P54764 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
EPHA4P54764 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA4P54764 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA4P54764 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
EPHA4P54764 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA4P54764 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
EPHA4P54764 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA4P54764 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
EPHA4P54764 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
EPHA4P54764 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA4P54764 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA4P54764 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA4P54764 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA4P54764 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.77□□□□□ -0.04
EPHA4P54764 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.77□□□□□ -0.04
EPHA4P54764 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.77□□□□□ -0.04
EPHA4P54764 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.77□□□□□ -0.05
EPHA4P54764 TPM3P8-201ENST00000330554 643 ntBASIC14.77□□□□□ -0.05
EPHA4P54764 FAM86MP-201ENST00000340703 885 ntBASIC14.77□□□□□ -0.05
EPHA4P54764 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
EPHA4P54764 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.77□□□□□ -0.05
EPHA4P54764 BRWD1P1-201ENST00000401091 371 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms