Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CACNA2D1P54289 ACA64.2-201ENST00000459014 129 ntBASIC16.31■□□□□ 0.2
CACNA2D1P54289 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 AP001889.1-201ENST00000525414 633 ntBASIC16.31■□□□□ 0.2
CACNA2D1P54289 SNX29P1-201ENST00000548357 1007 ntBASIC16.31■□□□□ 0.2
CACNA2D1P54289 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 AC015936.2-201ENST00000593177 259 ntBASIC16.31■□□□□ 0.2
CACNA2D1P54289 BTNL10-201ENST00000595971 695 ntBASIC16.31■□□□□ 0.2
CACNA2D1P54289 AL512343.1-201ENST00000605837 169 ntBASIC16.31■□□□□ 0.2
CACNA2D1P54289 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CACNA2D1P54289 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CACNA2D1P54289 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CACNA2D1P54289 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CACNA2D1P54289 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CACNA2D1P54289 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CACNA2D1P54289 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CACNA2D1P54289 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CACNA2D1P54289 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CACNA2D1P54289 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CACNA2D1P54289 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 CICP11-201ENST00000434745 2827 ntBASIC16.3■□□□□ 0.2
CACNA2D1P54289 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 AC068587.3-201ENST00000526613 355 ntBASIC16.3■□□□□ 0.2
CACNA2D1P54289 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 AC233724.13-201ENST00000598383 410 ntBASIC16.3■□□□□ 0.2
CACNA2D1P54289 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 NORAD-201ENST00000565493 5339 ntBASIC16.3■□□□□ 0.2
CACNA2D1P54289 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CACNA2D1P54289 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 AC073347.1-201ENST00000421633 2643 ntBASIC16.3■□□□□ 0.2
CACNA2D1P54289 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CACNA2D1P54289 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 ANKRD19P-201ENST00000338192 862 ntBASIC16.29■□□□□ 0.2
CACNA2D1P54289 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CACNA2D1P54289 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.29■□□□□ 0.2
CACNA2D1P54289 BCRP2-202ENST00000447763 634 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms