Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
PDX1P52945 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDX1P52945 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.94□□□□□ -0.02
PDX1P52945 AL354718.3-201ENST00000616414 581 ntBASIC14.94□□□□□ -0.02
PDX1P52945 CR382287.1-201ENST00000623954 586 ntBASIC14.94□□□□□ -0.02
PDX1P52945 AL139099.5-201ENST00000635274 300 ntBASIC14.94□□□□□ -0.02
PDX1P52945 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDX1P52945 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDX1P52945 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDX1P52945 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDX1P52945 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.94□□□□□ -0.02
PDX1P52945 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
PDX1P52945 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDX1P52945 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PDX1P52945 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDX1P52945 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDX1P52945 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDX1P52945 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDX1P52945 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
PDX1P52945 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDX1P52945 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.94□□□□□ -0.02
PDX1P52945 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.93□□□□□ -0.02
PDX1P52945 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.93□□□□□ -0.02
PDX1P52945 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
PDX1P52945 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.93□□□□□ -0.02
PDX1P52945 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.93□□□□□ -0.02
PDX1P52945 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.93□□□□□ -0.02
PDX1P52945 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PDX1P52945 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.93□□□□□ -0.02
PDX1P52945 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 AL133267.1-201ENST00000398220 340 ntBASIC14.93□□□□□ -0.02
PDX1P52945 GPAA1P2-201ENST00000417923 928 ntBASIC14.93□□□□□ -0.02
PDX1P52945 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
PDX1P52945 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.93□□□□□ -0.02
PDX1P52945 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.93□□□□□ -0.02
PDX1P52945 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.93□□□□□ -0.02
PDX1P52945 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PDX1P52945 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PDX1P52945 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PDX1P52945 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.93□□□□□ -0.02
PDX1P52945 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
PDX1P52945 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
PDX1P52945 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDX1P52945 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.93□□□□□ -0.02
PDX1P52945 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.92□□□□□ -0.02
PDX1P52945 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PDX1P52945 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.92□□□□□ -0.02
PDX1P52945 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.92□□□□□ -0.02
PDX1P52945 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.92□□□□□ -0.02
PDX1P52945 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
PDX1P52945 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PDX1P52945 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.92□□□□□ -0.02
PDX1P52945 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.92□□□□□ -0.02
PDX1P52945 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.92□□□□□ -0.02
PDX1P52945 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
PDX1P52945 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 FAM197Y7-201ENST00000432892 766 ntBASIC14.92□□□□□ -0.02
PDX1P52945 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.92□□□□□ -0.02
PDX1P52945 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.92□□□□□ -0.02
PDX1P52945 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.92□□□□□ -0.02
PDX1P52945 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
PDX1P52945 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.92□□□□□ -0.02
PDX1P52945 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.92□□□□□ -0.02
PDX1P52945 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.92□□□□□ -0.02
PDX1P52945 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.92□□□□□ -0.02
PDX1P52945 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.92□□□□□ -0.02
PDX1P52945 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDX1P52945 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms