Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC1A6P48664 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A6P48664 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SLC1A6P48664 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SLC1A6P48664 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
SLC1A6P48664 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A6P48664 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A6P48664 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A6P48664 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC1A6P48664 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A6P48664 AC106730.1-201ENST00000566722 1090 ntBASIC15.17■□□□□ 0.02
SLC1A6P48664 AC105021.1-202ENST00000570572 669 ntBASIC15.17■□□□□ 0.02
SLC1A6P48664 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A6P48664 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A6P48664 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A6P48664 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A6P48664 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A6P48664 AC007326.2-201ENST00000624224 7579 ntBASIC15.17■□□□□ 0.02
SLC1A6P48664 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A6P48664 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC1A6P48664 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A6P48664 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 ZNF259P1-201ENST00000407656 1365 ntBASIC15.16■□□□□ 0.02
SLC1A6P48664 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SLC1A6P48664 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC1A6P48664 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A6P48664 AL353705.2-201ENST00000428243 662 ntBASIC15.16■□□□□ 0.02
SLC1A6P48664 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 KRT18P3-201ENST00000451602 1288 ntBASIC15.16■□□□□ 0.02
SLC1A6P48664 TIMM8BP1-201ENST00000452384 211 ntBASIC15.16■□□□□ 0.02
SLC1A6P48664 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
SLC1A6P48664 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC1A6P48664 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC1A6P48664 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A6P48664 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A6P48664 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
SLC1A6P48664 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A6P48664 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SLC1A6P48664 IL9RP2-201ENST00000423948 1312 ntBASIC15.16■□□□□ 0.02
SLC1A6P48664 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A6P48664 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A6P48664 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A6P48664 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC1A6P48664 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC1A6P48664 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A6P48664 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SLC1A6P48664 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A6P48664 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms