Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.51■□□□□ 0.07
CHRNA4P43681 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA4P43681 WASH4P-201ENST00000564273 1246 ntBASIC15.51■□□□□ 0.07
CHRNA4P43681 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.51■□□□□ 0.07
CHRNA4P43681 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA4P43681 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
CHRNA4P43681 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNA4P43681 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.51■□□□□ 0.07
CHRNA4P43681 AC093726.1-201ENST00000608064 963 ntBASIC15.51■□□□□ 0.07
CHRNA4P43681 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNA4P43681 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHRNA4P43681 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CHRNA4P43681 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
CHRNA4P43681 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.51■□□□□ 0.07
CHRNA4P43681 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA4P43681 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA4P43681 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA4P43681 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHRNA4P43681 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA4P43681 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA4P43681 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CHRNA4P43681 AC106881.1-201ENST00000605849 3329 ntBASIC15.51■□□□□ 0.07
CHRNA4P43681 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CHRNA4P43681 AL157414.3-201ENST00000624276 1954 ntBASIC15.51■□□□□ 0.07
CHRNA4P43681 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA4P43681 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.51■□□□□ 0.07
CHRNA4P43681 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHRNA4P43681 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CHRNA4P43681 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHRNA4P43681 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CHRNA4P43681 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CHRNA4P43681 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA4P43681 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA4P43681 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA4P43681 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA4P43681 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA4P43681 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRNA4P43681 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRNA4P43681 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.5■□□□□ 0.07
CHRNA4P43681 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA4P43681 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.5■□□□□ 0.07
CHRNA4P43681 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.5■□□□□ 0.07
CHRNA4P43681 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.5■□□□□ 0.07
CHRNA4P43681 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CHRNA4P43681 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.5■□□□□ 0.07
CHRNA4P43681 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHRNA4P43681 INTS4P2-202ENST00000614726 2019 ntBASIC15.5■□□□□ 0.07
CHRNA4P43681 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CHRNA4P43681 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA4P43681 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CHRNA4P43681 AC007787.1-201ENST00000588095 1583 ntBASIC15.49■□□□□ 0.07
CHRNA4P43681 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CHRNA4P43681 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA4P43681 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA4P43681 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA4P43681 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRNA4P43681 AL138799.1-201ENST00000448213 1675 ntBASIC15.49■□□□□ 0.07
CHRNA4P43681 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 AC012508.2-201ENST00000567613 1472 ntBASIC15.49■□□□□ 0.07
CHRNA4P43681 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CHRNA4P43681 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHRNA4P43681 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.49■□□□□ 0.07
CHRNA4P43681 AC104596.2-201ENST00000512793 793 ntBASIC15.49■□□□□ 0.07
CHRNA4P43681 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.49■□□□□ 0.07
CHRNA4P43681 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.49■□□□□ 0.07
CHRNA4P43681 AC190387.1-201ENST00000551683 408 ntBASIC15.49■□□□□ 0.07
CHRNA4P43681 AC120045.2-201ENST00000567334 178 ntBASIC15.49■□□□□ 0.07
CHRNA4P43681 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.49■□□□□ 0.07
CHRNA4P43681 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.49■□□□□ 0.07
CHRNA4P43681 AC008494.3-201ENST00000606615 944 ntBASIC15.49■□□□□ 0.07
CHRNA4P43681 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms