Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.28■□□□□ 0.04
HMGCLP35914 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.28■□□□□ 0.04
HMGCLP35914 DBET-201ENST00000630918 3363 ntBASIC15.28■□□□□ 0.04
HMGCLP35914 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMGCLP35914 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HMGCLP35914 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGCLP35914 TSPY26P-202ENST00000565928 3884 ntBASIC15.27■□□□□ 0.04
HMGCLP35914 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
HMGCLP35914 KRT8P14-201ENST00000414254 1442 ntBASIC15.27■□□□□ 0.04
HMGCLP35914 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HMGCLP35914 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCLP35914 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
HMGCLP35914 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCLP35914 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HMGCLP35914 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HMGCLP35914 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGCLP35914 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HMGCLP35914 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HMGCLP35914 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGCLP35914 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HMGCLP35914 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCLP35914 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGCLP35914 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.27■□□□□ 0.04
HMGCLP35914 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HMGCLP35914 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCLP35914 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HMGCLP35914 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCLP35914 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGCLP35914 AC022137.2-201ENST00000503482 481 ntBASIC15.27■□□□□ 0.04
HMGCLP35914 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCLP35914 AC023824.1-201ENST00000562945 2975 ntBASIC15.27■□□□□ 0.04
HMGCLP35914 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.27■□□□□ 0.04
HMGCLP35914 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HMGCLP35914 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HMGCLP35914 AC010319.3-201ENST00000597028 470 ntBASIC15.27■□□□□ 0.04
HMGCLP35914 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.27■□□□□ 0.04
HMGCLP35914 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGCLP35914 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGCLP35914 AC105233.6-201ENST00000642093 218 ntBASIC15.27■□□□□ 0.04
HMGCLP35914 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCLP35914 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.27■□□□□ 0.03
HMGCLP35914 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCLP35914 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCLP35914 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCLP35914 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCLP35914 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCLP35914 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.27■□□□□ 0.03
HMGCLP35914 AL157414.3-201ENST00000624276 1954 ntBASIC15.27■□□□□ 0.03
HMGCLP35914 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.27■□□□□ 0.03
HMGCLP35914 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCLP35914 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.27■□□□□ 0.03
HMGCLP35914 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCLP35914 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HMGCLP35914 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.27■□□□□ 0.03
HMGCLP35914 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.27■□□□□ 0.03
HMGCLP35914 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.27■□□□□ 0.03
HMGCLP35914 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
HMGCLP35914 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HMGCLP35914 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGCLP35914 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGCLP35914 REXO1L5P-201ENST00000622260 2098 ntBASIC15.26■□□□□ 0.03
HMGCLP35914 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGCLP35914 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 ACE3P-201ENST00000423435 1973 ntBASIC15.26■□□□□ 0.03
HMGCLP35914 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGCLP35914 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGCLP35914 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
HMGCLP35914 HLA-K-203ENST00000430151 1046 ntBASIC15.26■□□□□ 0.03
HMGCLP35914 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGCLP35914 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.26■□□□□ 0.03
HMGCLP35914 AC093433.1-201ENST00000458048 571 ntBASIC15.26■□□□□ 0.03
HMGCLP35914 RN7SL837P-201ENST00000463010 287 ntBASIC15.26■□□□□ 0.03
HMGCLP35914 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HMGCLP35914 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.26■□□□□ 0.03
HMGCLP35914 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.26■□□□□ 0.03
HMGCLP35914 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGCLP35914 RPSAP52-203ENST00000622976 1023 ntBASIC15.26■□□□□ 0.03
HMGCLP35914 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGCLP35914 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGCLP35914 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HMGCLP35914 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGCLP35914 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HMGCLP35914 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCLP35914 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms