Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
USP6P35125 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.35■□□□□ 0.85
USP6P35125 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC20.35■□□□□ 0.85
USP6P35125 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6P35125 PRAL-201ENST00000624952 3286 ntBASIC20.35■□□□□ 0.85
USP6P35125 AC112693.3-201ENST00000624819 1983 ntBASIC20.35■□□□□ 0.85
USP6P35125 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC20.35■□□□□ 0.85
USP6P35125 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6P35125 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6P35125 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP6P35125 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6P35125 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6P35125 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6P35125 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP6P35125 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC20.35■□□□□ 0.85
USP6P35125 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP6P35125 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC20.35■□□□□ 0.85
USP6P35125 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC20.35■□□□□ 0.85
USP6P35125 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC20.35■□□□□ 0.85
USP6P35125 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC20.35■□□□□ 0.85
USP6P35125 AL645933.1-201ENST00000440087 609 ntBASIC20.35■□□□□ 0.85
USP6P35125 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC20.35■□□□□ 0.85
USP6P35125 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC20.35■□□□□ 0.85
USP6P35125 GCOM2-201ENST00000509133 1104 ntBASIC20.35■□□□□ 0.85
USP6P35125 SCARNA21-201ENST00000517026 139 ntBASIC20.35■□□□□ 0.85
USP6P35125 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC20.35■□□□□ 0.85
USP6P35125 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC20.35■□□□□ 0.85
USP6P35125 MVK-214ENST00000629016 1591 ntTSL 5 BASIC20.35■□□□□ 0.85
USP6P35125 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC20.34■□□□□ 0.85
USP6P35125 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.34■□□□□ 0.85
USP6P35125 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
USP6P35125 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
USP6P35125 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC20.34■□□□□ 0.85
USP6P35125 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
USP6P35125 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC20.34■□□□□ 0.85
USP6P35125 AC069218.1-201ENST00000435269 762 ntBASIC20.34■□□□□ 0.85
USP6P35125 AL157407.1-201ENST00000435784 904 ntBASIC20.34■□□□□ 0.85
USP6P35125 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC20.34■□□□□ 0.85
USP6P35125 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.34■□□□□ 0.85
USP6P35125 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC20.34■□□□□ 0.85
USP6P35125 AC090857.1-201ENST00000527400 390 ntBASIC20.34■□□□□ 0.85
USP6P35125 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC20.34■□□□□ 0.85
USP6P35125 RTN3P1-201ENST00000536295 711 ntBASIC20.34■□□□□ 0.85
USP6P35125 AC131206.1-201ENST00000538078 1211 ntBASIC20.34■□□□□ 0.85
USP6P35125 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
USP6P35125 MIR5572-201ENST00000583188 137 ntBASIC20.34■□□□□ 0.85
USP6P35125 U62317.3-201ENST00000608319 855 ntBASIC20.34■□□□□ 0.85
USP6P35125 AL157813.1-201ENST00000612996 587 ntBASIC20.34■□□□□ 0.85
USP6P35125 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
USP6P35125 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
USP6P35125 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP6P35125 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6P35125 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
USP6P35125 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
USP6P35125 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.33■□□□□ 0.85
USP6P35125 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6P35125 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
USP6P35125 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6P35125 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.33■□□□□ 0.85
USP6P35125 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
USP6P35125 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6P35125 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP6P35125 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC20.33■□□□□ 0.85
USP6P35125 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP6P35125 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP6P35125 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP6P35125 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC20.33■□□□□ 0.84
USP6P35125 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.33■□□□□ 0.84
USP6P35125 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP6P35125 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP6P35125 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP6P35125 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP6P35125 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC20.33■□□□□ 0.84
USP6P35125 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC20.33■□□□□ 0.84
USP6P35125 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.84
USP6P35125 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC20.33■□□□□ 0.84
USP6P35125 AC006453.1-201ENST00000636037 1257 ntBASIC20.33■□□□□ 0.84
USP6P35125 NAP1L6-202ENST00000641404 1222 ntBASIC20.33■□□□□ 0.84
USP6P35125 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP6P35125 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC20.33■□□□□ 0.84
USP6P35125 AC092978.1-202ENST00000637590 1327 ntBASIC20.33■□□□□ 0.84
USP6P35125 AC087481.3-201ENST00000602886 1894 ntBASIC20.33■□□□□ 0.84
USP6P35125 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms