Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
PTPN6P29350 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.62□□□□□ -0.07
PTPN6P29350 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.62□□□□□ -0.07
PTPN6P29350 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 UGT1A2P-201ENST00000454886 866 ntBASIC14.62□□□□□ -0.07
PTPN6P29350 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.62□□□□□ -0.07
PTPN6P29350 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.62□□□□□ -0.07
PTPN6P29350 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.62□□□□□ -0.07
PTPN6P29350 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.62□□□□□ -0.07
PTPN6P29350 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PTPN6P29350 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PTPN6P29350 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.62□□□□□ -0.07
PTPN6P29350 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.62□□□□□ -0.07
PTPN6P29350 AC092364.2-202ENST00000597012 1073 ntBASIC14.62□□□□□ -0.07
PTPN6P29350 AL844908.2-201ENST00000609461 460 ntBASIC14.62□□□□□ -0.07
PTPN6P29350 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PTPN6P29350 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.62□□□□□ -0.07
PTPN6P29350 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.62□□□□□ -0.07
PTPN6P29350 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.62□□□□□ -0.07
PTPN6P29350 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.62□□□□□ -0.07
PTPN6P29350 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PTPN6P29350 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
PTPN6P29350 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.62□□□□□ -0.07
PTPN6P29350 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.62□□□□□ -0.07
PTPN6P29350 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PTPN6P29350 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PTPN6P29350 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PTPN6P29350 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.61□□□□□ -0.07
PTPN6P29350 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.61□□□□□ -0.07
PTPN6P29350 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.61□□□□□ -0.07
PTPN6P29350 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.61□□□□□ -0.07
PTPN6P29350 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PTPN6P29350 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.61□□□□□ -0.07
PTPN6P29350 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PTPN6P29350 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.61□□□□□ -0.07
PTPN6P29350 AL133267.1-201ENST00000398220 340 ntBASIC14.61□□□□□ -0.07
PTPN6P29350 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.61□□□□□ -0.07
PTPN6P29350 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.61□□□□□ -0.07
PTPN6P29350 AC009477.1-201ENST00000452936 217 ntBASIC14.61□□□□□ -0.07
PTPN6P29350 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 SERBP1P3-201ENST00000459980 809 ntBASIC14.61□□□□□ -0.07
PTPN6P29350 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.61□□□□□ -0.07
PTPN6P29350 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.61□□□□□ -0.07
PTPN6P29350 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.61□□□□□ -0.07
PTPN6P29350 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.61□□□□□ -0.07
PTPN6P29350 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.61□□□□□ -0.07
PTPN6P29350 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.61□□□□□ -0.07
PTPN6P29350 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.61□□□□□ -0.07
PTPN6P29350 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.61□□□□□ -0.07
PTPN6P29350 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PTPN6P29350 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
PTPN6P29350 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.6□□□□□ -0.07
PTPN6P29350 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 AC022144.1-201ENST00000602255 1580 ntBASIC14.6□□□□□ -0.07
PTPN6P29350 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 MTHFR-210ENST00000641407 2387 ntBASIC14.6□□□□□ -0.07
PTPN6P29350 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.6□□□□□ -0.07
PTPN6P29350 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.6□□□□□ -0.07
PTPN6P29350 MRPS18AP1-201ENST00000414458 589 ntBASIC14.6□□□□□ -0.07
PTPN6P29350 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.6□□□□□ -0.07
PTPN6P29350 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.6□□□□□ -0.07
PTPN6P29350 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.6□□□□□ -0.07
PTPN6P29350 RN7SL618P-201ENST00000477850 296 ntBASIC14.6□□□□□ -0.07
PTPN6P29350 AL512361.1-201ENST00000554200 418 ntBASIC14.6□□□□□ -0.07
PTPN6P29350 MIR4745-201ENST00000577608 62 ntBASIC14.6□□□□□ -0.07
PTPN6P29350 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms