Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CHMP24386 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.45□□□□□ -0.1
CHMP24386 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.45□□□□□ -0.1
CHMP24386 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.45□□□□□ -0.1
CHMP24386 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.45□□□□□ -0.1
CHMP24386 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 SDHAP3-202ENST00000515467 728 ntBASIC14.45□□□□□ -0.1
CHMP24386 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 AL512361.1-201ENST00000554200 418 ntBASIC14.45□□□□□ -0.1
CHMP24386 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.45□□□□□ -0.1
CHMP24386 AC138761.1-201ENST00000584393 385 ntBASIC14.45□□□□□ -0.1
CHMP24386 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.45□□□□□ -0.1
CHMP24386 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.45□□□□□ -0.1
CHMP24386 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CHMP24386 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.45□□□□□ -0.1
CHMP24386 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHMP24386 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CHMP24386 AJ011931.1-201ENST00000618749 2492 ntBASIC14.44□□□□□ -0.1
CHMP24386 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CHMP24386 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CHMP24386 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.44□□□□□ -0.1
CHMP24386 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.44□□□□□ -0.1
CHMP24386 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.44□□□□□ -0.1
CHMP24386 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CHMP24386 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.44□□□□□ -0.1
CHMP24386 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.44□□□□□ -0.1
CHMP24386 AC002472.2-201ENST00000442739 958 ntBASIC14.44□□□□□ -0.1
CHMP24386 UGT1A2P-201ENST00000454886 866 ntBASIC14.44□□□□□ -0.1
CHMP24386 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.44□□□□□ -0.1
CHMP24386 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.44□□□□□ -0.1
CHMP24386 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.44□□□□□ -0.1
CHMP24386 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.44□□□□□ -0.1
CHMP24386 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.44□□□□□ -0.1
CHMP24386 AC190387.1-201ENST00000551683 408 ntBASIC14.44□□□□□ -0.1
CHMP24386 AC009407.1-201ENST00000568958 598 ntBASIC14.44□□□□□ -0.1
CHMP24386 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.44□□□□□ -0.1
CHMP24386 AC008761.3-201ENST00000624803 892 ntBASIC14.44□□□□□ -0.1
CHMP24386 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.44□□□□□ -0.1
CHMP24386 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.44□□□□□ -0.1
CHMP24386 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CHMP24386 AC005912.2-201ENST00000619492 2400 ntBASIC14.44□□□□□ -0.1
CHMP24386 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CHMP24386 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.44□□□□□ -0.1
CHMP24386 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CHMP24386 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CHMP24386 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHMP24386 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.44□□□□□ -0.1
CHMP24386 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP24386 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
CHMP24386 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.43□□□□□ -0.1
CHMP24386 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.43□□□□□ -0.1
CHMP24386 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHMP24386 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.43□□□□□ -0.1
CHMP24386 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms