Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.21□□□□□ -0.29
TNFSF4P23510 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TNFSF4P23510 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.21□□□□□ -0.3
TNFSF4P23510 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNFSF4P23510 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNFSF4P23510 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
TNFSF4P23510 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNFSF4P23510 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
TNFSF4P23510 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNFSF4P23510 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.21□□□□□ -0.3
TNFSF4P23510 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.21□□□□□ -0.3
TNFSF4P23510 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TNFSF4P23510 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNFSF4P23510 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNFSF4P23510 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TNFSF4P23510 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.2□□□□□ -0.3
TNFSF4P23510 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.2□□□□□ -0.3
TNFSF4P23510 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 INTS4P2-202ENST00000614726 2019 ntBASIC13.2□□□□□ -0.3
TNFSF4P23510 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TNFSF4P23510 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 AL035633.1-201ENST00000406139 838 ntBASIC13.2□□□□□ -0.3
TNFSF4P23510 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.2□□□□□ -0.3
TNFSF4P23510 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.2□□□□□ -0.3
TNFSF4P23510 AL162726.2-201ENST00000438986 1017 ntBASIC13.2□□□□□ -0.3
TNFSF4P23510 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.2□□□□□ -0.3
TNFSF4P23510 AC093813.1-201ENST00000605066 256 ntBASIC13.2□□□□□ -0.3
TNFSF4P23510 MIR8072-201ENST00000614241 80 ntBASIC13.2□□□□□ -0.3
TNFSF4P23510 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.2□□□□□ -0.3
TNFSF4P23510 AC025048.6-201ENST00000634326 1161 ntBASIC13.2□□□□□ -0.3
TNFSF4P23510 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TNFSF4P23510 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 AC105250.1-201ENST00000509378 2057 ntBASIC13.2□□□□□ -0.3
TNFSF4P23510 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
TNFSF4P23510 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.2□□□□□ -0.3
TNFSF4P23510 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.2□□□□□ -0.3
TNFSF4P23510 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFSF4P23510 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TNFSF4P23510 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.19□□□□□ -0.3
TNFSF4P23510 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TNFSF4P23510 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TNFSF4P23510 AC020658.6-201ENST00000623564 1870 ntBASIC13.19□□□□□ -0.3
TNFSF4P23510 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TNFSF4P23510 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.19□□□□□ -0.3
TNFSF4P23510 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 C1QBPP1-201ENST00000400117 770 ntBASIC13.19□□□□□ -0.3
TNFSF4P23510 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.19□□□□□ -0.3
TNFSF4P23510 VDAC1P7-201ENST00000462417 847 ntBASIC13.19□□□□□ -0.3
TNFSF4P23510 RN7SL752P-201ENST00000463779 287 ntBASIC13.19□□□□□ -0.3
TNFSF4P23510 RN7SL692P-201ENST00000464677 288 ntBASIC13.19□□□□□ -0.3
TNFSF4P23510 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.19□□□□□ -0.3
TNFSF4P23510 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.19□□□□□ -0.3
TNFSF4P23510 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TNFSF4P23510 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.19□□□□□ -0.3
TNFSF4P23510 BRI3BPP1-201ENST00000594224 787 ntBASIC13.19□□□□□ -0.3
TNFSF4P23510 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TNFSF4P23510 LINC02084-201ENST00000606069 1096 ntBASIC13.19□□□□□ -0.3
TNFSF4P23510 AC025181.2-201ENST00000606994 802 ntBASIC13.19□□□□□ -0.3
TNFSF4P23510 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.19□□□□□ -0.3
TNFSF4P23510 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
TNFSF4P23510 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFSF4P23510 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms