Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 GHSR-202ENST00000427970 912 ntBASIC14.34□□□□□ -0.11
TNFRSF1BP20333 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 AC007967.4-201ENST00000614700 386 ntBASIC14.34□□□□□ -0.11
TNFRSF1BP20333 MIR6080-201ENST00000617359 66 ntBASIC14.34□□□□□ -0.11
TNFRSF1BP20333 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFRSF1BP20333 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TNFRSF1BP20333 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TNFRSF1BP20333 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.33□□□□□ -0.11
TNFRSF1BP20333 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TNFRSF1BP20333 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.11
TNFRSF1BP20333 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TNFRSF1BP20333 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TNFRSF1BP20333 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TNFRSF1BP20333 REXO1L4P-201ENST00000605109 1937 ntBASIC14.33□□□□□ -0.11
TNFRSF1BP20333 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 SLED1-202ENST00000512051 380 ntBASIC14.33□□□□□ -0.12
TNFRSF1BP20333 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 AL079307.3-201ENST00000556114 283 ntBASIC14.33□□□□□ -0.12
TNFRSF1BP20333 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 AC015910.1-201ENST00000579400 975 ntBASIC14.33□□□□□ -0.12
TNFRSF1BP20333 AF228730.6-201ENST00000641497 218 ntBASIC14.33□□□□□ -0.12
TNFRSF1BP20333 AC084121.3-201ENST00000641716 218 ntBASIC14.33□□□□□ -0.12
TNFRSF1BP20333 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 ST20-AS1-201ENST00000560255 4223 ntBASIC14.33□□□□□ -0.12
TNFRSF1BP20333 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TNFRSF1BP20333 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 OR2I1P-209ENST00000641730 5365 ntBASIC14.32□□□□□ -0.12
TNFRSF1BP20333 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms