Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPA1P20036 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DPA1P20036 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DPA1P20036 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DPA1P20036 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HLA-DPA1P20036 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HLA-DPA1P20036 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DPA1P20036 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 LINC00554-201ENST00000564841 3011 ntBASIC15.54■□□□□ 0.08
HLA-DPA1P20036 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AC087499.6-201ENST00000411576 835 ntBASIC15.54■□□□□ 0.08
HLA-DPA1P20036 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AC004066.1-201ENST00000502488 802 ntBASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AC026410.3-201ENST00000514280 936 ntBASIC15.54■□□□□ 0.08
HLA-DPA1P20036 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 SAMD11P1-201ENST00000571429 661 ntBASIC15.54■□□□□ 0.08
HLA-DPA1P20036 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 BRI3BPP1-201ENST00000594224 787 ntBASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AL132655.2-201ENST00000596276 594 ntBASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AL662799.1-202ENST00000614205 422 ntBASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AC008761.3-201ENST00000624803 892 ntBASIC15.54■□□□□ 0.08
HLA-DPA1P20036 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AGAP7P-201ENST00000582299 2062 ntBASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AGAP14-201ENST00000624701 2060 ntBASIC15.54■□□□□ 0.08
HLA-DPA1P20036 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DPA1P20036 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 ZBED1P1-201ENST00000502364 1930 ntBASIC15.53■□□□□ 0.08
HLA-DPA1P20036 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 DBET-201ENST00000630918 3363 ntBASIC15.53■□□□□ 0.08
HLA-DPA1P20036 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 RN7SL204P-201ENST00000582831 262 ntBASIC15.53■□□□□ 0.08
HLA-DPA1P20036 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 AC107373.2-201ENST00000607735 490 ntBASIC15.53■□□□□ 0.08
HLA-DPA1P20036 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HLA-DPA1P20036 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms