Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATF3P18847 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC20.72■□□□□ 0.91
ATF3P18847 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 SKA2-202ENST00000437036 625 ntTSL 2 BASIC20.72■□□□□ 0.91
ATF3P18847 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC20.72■□□□□ 0.91
ATF3P18847 TMCO5B-205ENST00000530020 894 ntBASIC20.72■□□□□ 0.91
ATF3P18847 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 DNM1P51-201ENST00000558149 522 ntBASIC20.72■□□□□ 0.91
ATF3P18847 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
ATF3P18847 AC025262.2-201ENST00000623975 1056 ntBASIC20.72■□□□□ 0.91
ATF3P18847 AC005618.3-201ENST00000624928 458 ntBASIC20.72■□□□□ 0.91
ATF3P18847 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC20.72■□□□□ 0.91
ATF3P18847 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
ATF3P18847 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ATF3P18847 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
ATF3P18847 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATF3P18847 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC20.72■□□□□ 0.91
ATF3P18847 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
ATF3P18847 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ATF3P18847 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
ATF3P18847 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.71■□□□□ 0.91
ATF3P18847 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC20.71■□□□□ 0.91
ATF3P18847 BAK1P1-201ENST00000317045 636 ntBASIC20.71■□□□□ 0.91
ATF3P18847 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.71■□□□□ 0.91
ATF3P18847 RN7SKP230-201ENST00000365642 335 ntBASIC20.71■□□□□ 0.91
ATF3P18847 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ATF3P18847 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC20.71■□□□□ 0.91
ATF3P18847 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC20.71■□□□□ 0.91
ATF3P18847 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC20.71■□□□□ 0.91
ATF3P18847 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.71■□□□□ 0.91
ATF3P18847 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.71■□□□□ 0.91
ATF3P18847 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.71■□□□□ 0.91
ATF3P18847 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 AC127383.1-201ENST00000444697 1800 ntBASIC20.71■□□□□ 0.91
ATF3P18847 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.71■□□□□ 0.91
ATF3P18847 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 AC090502.4-201ENST00000551714 1386 ntBASIC20.71■□□□□ 0.91
ATF3P18847 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATF3P18847 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ATF3P18847 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ATF3P18847 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.7■□□□□ 0.9
ATF3P18847 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.7■□□□□ 0.9
ATF3P18847 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATF3P18847 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATF3P18847 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATF3P18847 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATF3P18847 HIST2H2BA-201ENST00000412169 381 ntBASIC20.7■□□□□ 0.9
ATF3P18847 AL807761.2-201ENST00000422849 729 ntBASIC20.7■□□□□ 0.9
ATF3P18847 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.7■□□□□ 0.9
ATF3P18847 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC20.7■□□□□ 0.9
ATF3P18847 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC20.7■□□□□ 0.9
ATF3P18847 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATF3P18847 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATF3P18847 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC20.7■□□□□ 0.9
ATF3P18847 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ATF3P18847 MIR5196-201ENST00000578146 115 ntBASIC20.7■□□□□ 0.9
ATF3P18847 NUDT4P2-201ENST00000578341 546 ntBASIC20.7■□□□□ 0.9
ATF3P18847 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ATF3P18847 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC20.7■□□□□ 0.9
ATF3P18847 LINC00431-202ENST00000636375 159 ntBASIC20.7■□□□□ 0.9
ATF3P18847 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATF3P18847 MST1L-201ENST00000442552 2185 ntBASIC20.7■□□□□ 0.9
ATF3P18847 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ATF3P18847 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATF3P18847 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATF3P18847 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ATF3P18847 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.7■□□□□ 0.9
ATF3P18847 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
ATF3P18847 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.69■□□□□ 0.9
ATF3P18847 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATF3P18847 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATF3P18847 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.69■□□□□ 0.9
ATF3P18847 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATF3P18847 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATF3P18847 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATF3P18847 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATF3P18847 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATF3P18847 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
ATF3P18847 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATF3P18847 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
ATF3P18847 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms