Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMC3P17980 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PSMC3P17980 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMC3P17980 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMC3P17980 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PSMC3P17980 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMC3P17980 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMC3P17980 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMC3P17980 MTHFR-217ENST00000641820 1569 ntBASIC16.09■□□□□ 0.17
PSMC3P17980 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.08■□□□□ 0.17
PSMC3P17980 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PSMC3P17980 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PSMC3P17980 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.08■□□□□ 0.17
PSMC3P17980 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PSMC3P17980 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.08■□□□□ 0.17
PSMC3P17980 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PSMC3P17980 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
PSMC3P17980 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PSMC3P17980 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PSMC3P17980 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PSMC3P17980 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PSMC3P17980 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PSMC3P17980 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.08■□□□□ 0.16
PSMC3P17980 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
PSMC3P17980 MIR648-201ENST00000385046 94 ntBASIC16.08■□□□□ 0.16
PSMC3P17980 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.08■□□□□ 0.16
PSMC3P17980 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.08■□□□□ 0.16
PSMC3P17980 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.08■□□□□ 0.16
PSMC3P17980 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.08■□□□□ 0.16
PSMC3P17980 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.08■□□□□ 0.16
PSMC3P17980 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.08■□□□□ 0.16
PSMC3P17980 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.08■□□□□ 0.16
PSMC3P17980 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.08■□□□□ 0.16
PSMC3P17980 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.08■□□□□ 0.16
PSMC3P17980 AC068587.10-201ENST00000641210 219 ntBASIC16.08■□□□□ 0.16
PSMC3P17980 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.08■□□□□ 0.16
PSMC3P17980 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.08■□□□□ 0.16
PSMC3P17980 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.08■□□□□ 0.16
PSMC3P17980 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.08■□□□□ 0.16
PSMC3P17980 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
PSMC3P17980 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.08■□□□□ 0.16
PSMC3P17980 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PSMC3P17980 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PSMC3P17980 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PSMC3P17980 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.07■□□□□ 0.16
PSMC3P17980 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PSMC3P17980 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.07■□□□□ 0.16
PSMC3P17980 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PSMC3P17980 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.07■□□□□ 0.16
PSMC3P17980 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PSMC3P17980 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PSMC3P17980 AC006001.1-201ENST00000325130 474 ntBASIC16.07■□□□□ 0.16
PSMC3P17980 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.07■□□□□ 0.16
PSMC3P17980 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.07■□□□□ 0.16
PSMC3P17980 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.07■□□□□ 0.16
PSMC3P17980 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.07■□□□□ 0.16
PSMC3P17980 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.07■□□□□ 0.16
PSMC3P17980 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.07■□□□□ 0.16
PSMC3P17980 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PSMC3P17980 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.07■□□□□ 0.16
PSMC3P17980 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.07■□□□□ 0.16
PSMC3P17980 AC011477.6-201ENST00000604980 1927 ntBASIC16.07■□□□□ 0.16
PSMC3P17980 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.07■□□□□ 0.16
PSMC3P17980 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PSMC3P17980 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.07■□□□□ 0.16
PSMC3P17980 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PSMC3P17980 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.07■□□□□ 0.16
PSMC3P17980 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PSMC3P17980 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PSMC3P17980 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.07■□□□□ 0.16
PSMC3P17980 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.06■□□□□ 0.16
PSMC3P17980 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
PSMC3P17980 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.06■□□□□ 0.16
PSMC3P17980 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PSMC3P17980 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.06■□□□□ 0.16
PSMC3P17980 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PSMC3P17980 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms