Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 AC027796.2-201ENST00000575326 344 ntBASIC16.27■□□□□ 0.2
CHRNB2P17787 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNB2P17787 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNB2P17787 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNB2P17787 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.27■□□□□ 0.19
CHRNB2P17787 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNB2P17787 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.27■□□□□ 0.19
CHRNB2P17787 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
CHRNB2P17787 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CHRNB2P17787 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNB2P17787 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CHRNB2P17787 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNB2P17787 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNB2P17787 AL158070.2-201ENST00000623713 1621 ntBASIC16.27■□□□□ 0.19
CHRNB2P17787 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 AC018442.1-201ENST00000421439 2061 ntBASIC16.26■□□□□ 0.19
CHRNB2P17787 SLC7A15P-201ENST00000424028 1363 ntBASIC16.26■□□□□ 0.19
CHRNB2P17787 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNB2P17787 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHRNB2P17787 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNB2P17787 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNB2P17787 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CHRNB2P17787 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CHRNB2P17787 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 AC098850.1-201ENST00000419919 790 ntBASIC16.26■□□□□ 0.19
CHRNB2P17787 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 SERBP1P5-201ENST00000510079 1181 ntBASIC16.26■□□□□ 0.19
CHRNB2P17787 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.26■□□□□ 0.19
CHRNB2P17787 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.26■□□□□ 0.19
CHRNB2P17787 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.26■□□□□ 0.19
CHRNB2P17787 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CHRNB2P17787 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CHRNB2P17787 AC007191.1-201ENST00000623179 2995 ntBASIC16.26■□□□□ 0.19
CHRNB2P17787 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNB2P17787 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 AC005912.2-201ENST00000619492 2400 ntBASIC16.26■□□□□ 0.19
CHRNB2P17787 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNB2P17787 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNB2P17787 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CHRNB2P17787 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHRNB2P17787 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNB2P17787 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CHRNB2P17787 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNB2P17787 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNB2P17787 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNB2P17787 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHRNB2P17787 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNB2P17787 INGX-202ENST00000489074 768 ntBASIC16.25■□□□□ 0.19
CHRNB2P17787 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRNB2P17787 RNA5SP421-201ENST00000516864 134 ntBASIC16.25■□□□□ 0.19
CHRNB2P17787 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNB2P17787 RRP7BP-205ENST00000566851 833 ntBASIC16.25■□□□□ 0.19
CHRNB2P17787 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CHRNB2P17787 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNB2P17787 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.25■□□□□ 0.19
CHRNB2P17787 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRNB2P17787 AC026748.1-201ENST00000624349 3251 ntBASIC16.25■□□□□ 0.19
CHRNB2P17787 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CHRNB2P17787 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CHRNB2P17787 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms