Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.8■□□□□ 0.44
CAPN2P17655 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.8■□□□□ 0.44
CAPN2P17655 AL049840.4-201ENST00000602422 811 ntBASIC17.8■□□□□ 0.44
CAPN2P17655 AL021578.1-201ENST00000613646 709 ntBASIC17.8■□□□□ 0.44
CAPN2P17655 AC132938.4-201ENST00000623835 848 ntBASIC17.8■□□□□ 0.44
CAPN2P17655 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.8■□□□□ 0.44
CAPN2P17655 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CAPN2P17655 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN2P17655 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CAPN2P17655 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN2P17655 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN2P17655 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CAPN2P17655 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.8■□□□□ 0.44
CAPN2P17655 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN2P17655 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CAPN2P17655 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.79■□□□□ 0.44
CAPN2P17655 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.79■□□□□ 0.44
CAPN2P17655 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 LINC02012-201ENST00000608206 1725 ntBASIC17.79■□□□□ 0.44
CAPN2P17655 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN2P17655 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CAPN2P17655 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN2P17655 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.79■□□□□ 0.44
CAPN2P17655 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 KRT8P19-201ENST00000551916 1455 ntBASIC17.79■□□□□ 0.44
CAPN2P17655 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN2P17655 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CAPN2P17655 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN2P17655 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
CAPN2P17655 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.79■□□□□ 0.44
CAPN2P17655 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN2P17655 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 AL137784.3-201ENST00000623858 2288 ntBASIC17.78■□□□□ 0.44
CAPN2P17655 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CAPN2P17655 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.78■□□□□ 0.44
CAPN2P17655 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN2P17655 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.78■□□□□ 0.44
CAPN2P17655 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN2P17655 CD8B2-202ENST00000417670 633 ntBASIC17.78■□□□□ 0.44
CAPN2P17655 HINT2P1-201ENST00000419438 481 ntBASIC17.78■□□□□ 0.44
CAPN2P17655 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN2P17655 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.78■□□□□ 0.44
CAPN2P17655 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.78■□□□□ 0.44
CAPN2P17655 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CAPN2P17655 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.78■□□□□ 0.44
CAPN2P17655 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN2P17655 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN2P17655 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 AP006547.1-201ENST00000563435 692 ntBASIC17.78■□□□□ 0.44
CAPN2P17655 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.78■□□□□ 0.44
CAPN2P17655 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.78■□□□□ 0.44
CAPN2P17655 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN2P17655 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.78■□□□□ 0.44
CAPN2P17655 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CAPN2P17655 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN2P17655 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 GPAA1P2-202ENST00000606848 1787 ntBASIC17.78■□□□□ 0.44
CAPN2P17655 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 AC092053.1-201ENST00000605787 1936 ntBASIC17.78■□□□□ 0.44
CAPN2P17655 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.78■□□□□ 0.44
CAPN2P17655 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CAPN2P17655 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN2P17655 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CAPN2P17655 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CAPN2P17655 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CAPN2P17655 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms