Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC15.23■□□□□ 0.03
HOXB3P14651 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXB3P14651 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC15.23■□□□□ 0.03
HOXB3P14651 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXB3P14651 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC15.23■□□□□ 0.03
HOXB3P14651 AC040904.1-201ENST00000590850 223 ntBASIC15.23■□□□□ 0.03
HOXB3P14651 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC15.23■□□□□ 0.03
HOXB3P14651 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.23■□□□□ 0.03
HOXB3P14651 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXB3P14651 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
HOXB3P14651 RDM1-219ENST00000615378 542 ntTSL 3 BASIC15.23■□□□□ 0.03
HOXB3P14651 AP003419.4-201ENST00000616071 517 ntBASIC15.23■□□□□ 0.03
HOXB3P14651 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.23■□□□□ 0.03
HOXB3P14651 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC15.23■□□□□ 0.03
HOXB3P14651 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.23■□□□□ 0.03
HOXB3P14651 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXB3P14651 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.23■□□□□ 0.03
HOXB3P14651 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.23■□□□□ 0.03
HOXB3P14651 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HOXB3P14651 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXB3P14651 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HOXB3P14651 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HOXB3P14651 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HOXB3P14651 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXB3P14651 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HOXB3P14651 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXB3P14651 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXB3P14651 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.23■□□□□ 0.03
HOXB3P14651 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXB3P14651 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXB3P14651 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXB3P14651 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
HOXB3P14651 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXB3P14651 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HOXB3P14651 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.22■□□□□ 0.03
HOXB3P14651 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 AC114495.2-201ENST00000452686 437 ntBASIC15.22■□□□□ 0.03
HOXB3P14651 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.22■□□□□ 0.03
HOXB3P14651 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC15.22■□□□□ 0.03
HOXB3P14651 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
HOXB3P14651 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXB3P14651 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXB3P14651 AP001258.2-201ENST00000529891 490 ntBASIC15.22■□□□□ 0.03
HOXB3P14651 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXB3P14651 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.22■□□□□ 0.03
HOXB3P14651 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
HOXB3P14651 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.22■□□□□ 0.03
HOXB3P14651 MIR4313-201ENST00000580760 101 ntBASIC15.22■□□□□ 0.03
HOXB3P14651 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXB3P14651 AC233724.13-201ENST00000598383 410 ntBASIC15.22■□□□□ 0.03
HOXB3P14651 AC097359.3-201ENST00000603982 1210 ntBASIC15.22■□□□□ 0.03
HOXB3P14651 AC011458.1-201ENST00000604034 617 ntBASIC15.22■□□□□ 0.03
HOXB3P14651 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC15.22■□□□□ 0.03
HOXB3P14651 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXB3P14651 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXB3P14651 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 AL607033.1-201ENST00000623900 1599 ntBASIC15.22■□□□□ 0.03
HOXB3P14651 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXB3P14651 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXB3P14651 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXB3P14651 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.22■□□□□ 0.03
HOXB3P14651 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXB3P14651 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXB3P14651 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HOXB3P14651 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXB3P14651 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.22■□□□□ 0.03
HOXB3P14651 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
HOXB3P14651 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 AP005117.1-202ENST00000581724 1908 ntBASIC15.21■□□□□ 0.03
HOXB3P14651 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.21■□□□□ 0.03
HOXB3P14651 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.21■□□□□ 0.03
HOXB3P14651 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HOXB3P14651 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms