Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.06□□□□□ -0.48
CD28P10747 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 AL138799.1-201ENST00000448213 1675 ntBASIC12.06□□□□□ -0.48
CD28P10747 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.06□□□□□ -0.48
CD28P10747 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.05□□□□□ -0.48
CD28P10747 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CD28P10747 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.05□□□□□ -0.48
CD28P10747 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.05□□□□□ -0.48
CD28P10747 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.05□□□□□ -0.48
CD28P10747 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.05□□□□□ -0.48
CD28P10747 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
CD28P10747 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.05□□□□□ -0.48
CD28P10747 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.05□□□□□ -0.48
CD28P10747 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.05□□□□□ -0.48
CD28P10747 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.05□□□□□ -0.48
CD28P10747 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CD28P10747 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.05□□□□□ -0.48
CD28P10747 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 AP005019.2-201ENST00000615104 511 ntBASIC12.05□□□□□ -0.48
CD28P10747 MIR6869-201ENST00000619434 62 ntBASIC12.05□□□□□ -0.48
CD28P10747 BX539320.1-201ENST00000623759 877 ntBASIC12.05□□□□□ -0.48
CD28P10747 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CD28P10747 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CD28P10747 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.05□□□□□ -0.48
CD28P10747 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
CD28P10747 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CD28P10747 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 OR2I1P-210ENST00000642037 4691 ntBASIC12.04□□□□□ -0.48
CD28P10747 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.04□□□□□ -0.48
CD28P10747 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 LINC02447-202ENST00000501888 2146 ntBASIC12.04□□□□□ -0.48
CD28P10747 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.04□□□□□ -0.48
CD28P10747 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CD28P10747 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.04□□□□□ -0.48
CD28P10747 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.04□□□□□ -0.48
CD28P10747 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.04□□□□□ -0.48
CD28P10747 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.04□□□□□ -0.48
CD28P10747 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.04□□□□□ -0.48
CD28P10747 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms