Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SPDYE11-202ENST00000450699 704 ntBASIC17.03■□□□□ 0.32
TPM1P09493 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.03■□□□□ 0.32
TPM1P09493 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.03■□□□□ 0.32
TPM1P09493 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.03■□□□□ 0.32
TPM1P09493 AP000842.3-202ENST00000569238 1080 ntBASIC17.03■□□□□ 0.32
TPM1P09493 SPDYE9P-201ENST00000570642 692 ntBASIC17.03■□□□□ 0.32
TPM1P09493 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.03■□□□□ 0.32
TPM1P09493 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.03■□□□□ 0.32
TPM1P09493 SPDYE10P-202ENST00000612005 668 ntBASIC17.03■□□□□ 0.32
TPM1P09493 SPDYE8P-202ENST00000612377 668 ntBASIC17.03■□□□□ 0.32
TPM1P09493 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.03■□□□□ 0.32
TPM1P09493 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TPM1P09493 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM1P09493 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TPM1P09493 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.03■□□□□ 0.32
TPM1P09493 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM1P09493 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.03■□□□□ 0.32
TPM1P09493 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM1P09493 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
TPM1P09493 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM1P09493 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TPM1P09493 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM1P09493 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.02■□□□□ 0.32
TPM1P09493 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.02■□□□□ 0.32
TPM1P09493 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM1P09493 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TPM1P09493 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TPM1P09493 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TPM1P09493 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM1P09493 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TPM1P09493 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
TPM1P09493 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
TPM1P09493 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
TPM1P09493 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM1P09493 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM1P09493 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM1P09493 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TPM1P09493 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM1P09493 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TPM1P09493 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM1P09493 AZGP1P1-201ENST00000411909 902 ntBASIC17.02■□□□□ 0.32
TPM1P09493 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM1P09493 AL450487.1-201ENST00000426799 995 ntBASIC17.02■□□□□ 0.32
TPM1P09493 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TPM1P09493 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.02■□□□□ 0.32
TPM1P09493 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.02■□□□□ 0.32
TPM1P09493 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.02■□□□□ 0.32
TPM1P09493 KRT8P23-201ENST00000560090 1207 ntBASIC17.02■□□□□ 0.32
TPM1P09493 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM1P09493 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.02■□□□□ 0.32
TPM1P09493 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.02■□□□□ 0.32
TPM1P09493 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.02■□□□□ 0.32
TPM1P09493 AC011467.4-201ENST00000594891 528 ntBASIC17.02■□□□□ 0.32
TPM1P09493 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TPM1P09493 AC091812.2-201ENST00000619081 385 ntBASIC17.02■□□□□ 0.32
TPM1P09493 CICP11-201ENST00000434745 2827 ntBASIC17.02■□□□□ 0.32
TPM1P09493 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
TPM1P09493 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TPM1P09493 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.02■□□□□ 0.31
TPM1P09493 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPM1P09493 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPM1P09493 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.02■□□□□ 0.31
TPM1P09493 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPM1P09493 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPM1P09493 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPM1P09493 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TPM1P09493 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TPM1P09493 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TPM1P09493 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TPM1P09493 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
TPM1P09493 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM1P09493 ACE3P-201ENST00000423435 1973 ntBASIC17.01■□□□□ 0.31
TPM1P09493 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 MIR346-201ENST00000362234 95 ntBASIC17.01■□□□□ 0.31
TPM1P09493 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM1P09493 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM1P09493 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TPM1P09493 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM1P09493 SLC25A6P4-201ENST00000586535 553 ntBASIC17.01■□□□□ 0.31
TPM1P09493 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM1P09493 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM1P09493 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM1P09493 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM1P09493 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms