Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
MMP2P08253 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.42■□□□□ 0.06
MMP2P08253 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP2P08253 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 AP001063.1-201ENST00000568332 529 ntBASIC15.42■□□□□ 0.06
MMP2P08253 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.42■□□□□ 0.06
MMP2P08253 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.42■□□□□ 0.06
MMP2P08253 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MMP2P08253 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP2P08253 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 KRT8P14-201ENST00000414254 1442 ntBASIC15.42■□□□□ 0.06
MMP2P08253 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
MMP2P08253 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP2P08253 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.41■□□□□ 0.06
MMP2P08253 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP2P08253 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 AC098614.1-201ENST00000368528 745 ntBASIC15.41■□□□□ 0.06
MMP2P08253 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.41■□□□□ 0.06
MMP2P08253 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
MMP2P08253 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MMP2P08253 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP2P08253 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.41■□□□□ 0.06
MMP2P08253 RN7SL837P-201ENST00000463010 287 ntBASIC15.41■□□□□ 0.06
MMP2P08253 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.41■□□□□ 0.06
MMP2P08253 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 AP005019.2-201ENST00000615104 511 ntBASIC15.41■□□□□ 0.06
MMP2P08253 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MMP2P08253 AP002414.2-201ENST00000591780 3365 ntBASIC15.41■□□□□ 0.06
MMP2P08253 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP2P08253 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP2P08253 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP2P08253 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP2P08253 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
MMP2P08253 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP2P08253 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 AC013726.1-201ENST00000563747 2285 ntBASIC15.4■□□□□ 0.06
MMP2P08253 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.4■□□□□ 0.06
MMP2P08253 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MMP2P08253 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
MMP2P08253 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.4■□□□□ 0.06
MMP2P08253 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MMP2P08253 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
MMP2P08253 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.4■□□□□ 0.06
MMP2P08253 ACTG1P3-201ENST00000431775 1114 ntBASIC15.4■□□□□ 0.06
MMP2P08253 AC114812.1-204ENST00000449669 728 ntBASIC15.4■□□□□ 0.06
MMP2P08253 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 AC022137.2-201ENST00000503482 481 ntBASIC15.4■□□□□ 0.06
MMP2P08253 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.4■□□□□ 0.06
MMP2P08253 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 DUX4L47-201ENST00000566374 394 ntBASIC15.4■□□□□ 0.06
MMP2P08253 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MMP2P08253 MIR5189-201ENST00000577370 114 ntBASIC15.4■□□□□ 0.06
MMP2P08253 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.4■□□□□ 0.06
MMP2P08253 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.4■□□□□ 0.06
MMP2P08253 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP2P08253 AC027307.3-201ENST00000594262 1100 ntBASIC15.4■□□□□ 0.06
MMP2P08253 AC010319.3-201ENST00000597028 470 ntBASIC15.4■□□□□ 0.06
MMP2P08253 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP2P08253 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.4■□□□□ 0.06
MMP2P08253 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms