Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RETP07949 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.52■□□□□ 0.07
RETP07949 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RETP07949 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RETP07949 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.52■□□□□ 0.07
RETP07949 TSPY26P-202ENST00000565928 3884 ntBASIC15.52■□□□□ 0.07
RETP07949 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RETP07949 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RETP07949 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.52■□□□□ 0.07
RETP07949 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RETP07949 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RETP07949 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 AC144831.1-201ENST00000573312 2656 ntBASIC15.51■□□□□ 0.07
RETP07949 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.51■□□□□ 0.07
RETP07949 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RETP07949 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.51■□□□□ 0.07
RETP07949 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.51■□□□□ 0.07
RETP07949 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.51■□□□□ 0.07
RETP07949 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RETP07949 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RETP07949 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RETP07949 CD8B2-202ENST00000417670 633 ntBASIC15.51■□□□□ 0.07
RETP07949 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.51■□□□□ 0.07
RETP07949 AL133466.1-201ENST00000447582 150 ntBASIC15.51■□□□□ 0.07
RETP07949 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.51■□□□□ 0.07
RETP07949 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.51■□□□□ 0.07
RETP07949 RN7SL720P-201ENST00000488178 304 ntBASIC15.51■□□□□ 0.07
RETP07949 IMP3P2-201ENST00000489760 475 ntBASIC15.51■□□□□ 0.07
RETP07949 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.51■□□□□ 0.07
RETP07949 AC245884.6-201ENST00000515672 1067 ntBASIC15.51■□□□□ 0.07
RETP07949 RNA5SP486-201ENST00000515961 83 ntBASIC15.51■□□□□ 0.07
RETP07949 AC126915.1-201ENST00000522847 1038 ntBASIC15.51■□□□□ 0.07
RETP07949 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.51■□□□□ 0.07
RETP07949 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.51■□□□□ 0.07
RETP07949 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.51■□□□□ 0.07
RETP07949 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.51■□□□□ 0.07
RETP07949 AP005019.2-201ENST00000615104 511 ntBASIC15.51■□□□□ 0.07
RETP07949 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.51■□□□□ 0.07
RETP07949 AC006453.4-201ENST00000636949 1252 ntBASIC15.51■□□□□ 0.07
RETP07949 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RETP07949 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.51■□□□□ 0.07
RETP07949 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RETP07949 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RETP07949 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.51■□□□□ 0.07
RETP07949 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RETP07949 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.51■□□□□ 0.07
RETP07949 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RETP07949 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.5■□□□□ 0.07
RETP07949 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 MIR33B-201ENST00000385104 96 ntBASIC15.5■□□□□ 0.07
RETP07949 MIR769-201ENST00000390225 118 ntBASIC15.5■□□□□ 0.07
RETP07949 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.5■□□□□ 0.07
RETP07949 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.5■□□□□ 0.07
RETP07949 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.5■□□□□ 0.07
RETP07949 AC245100.5-201ENST00000452108 331 ntBASIC15.5■□□□□ 0.07
RETP07949 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.5■□□□□ 0.07
RETP07949 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.5■□□□□ 0.07
RETP07949 AP001582.1-201ENST00000525856 295 ntBASIC15.5■□□□□ 0.07
RETP07949 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.5■□□□□ 0.07
RETP07949 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.5■□□□□ 0.07
RETP07949 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.5■□□□□ 0.07
RETP07949 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RETP07949 AC145423.3-201ENST00000615987 467 ntBASIC15.5■□□□□ 0.07
RETP07949 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.5■□□□□ 0.07
RETP07949 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.5■□□□□ 0.07
RETP07949 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RETP07949 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms