Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RB1P06400 RN7SKP175-201ENST00000408472 289 ntBASIC16.1■□□□□ 0.17
RB1P06400 HLA-K-203ENST00000430151 1046 ntBASIC16.1■□□□□ 0.17
RB1P06400 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.1■□□□□ 0.17
RB1P06400 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.1■□□□□ 0.17
RB1P06400 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
RB1P06400 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
RB1P06400 AC103988.2-201ENST00000561804 725 ntBASIC16.1■□□□□ 0.17
RB1P06400 DUX4L46-201ENST00000566845 751 ntBASIC16.1■□□□□ 0.17
RB1P06400 MIR4683-201ENST00000579659 81 ntBASIC16.1■□□□□ 0.17
RB1P06400 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.1■□□□□ 0.17
RB1P06400 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.1■□□□□ 0.17
RB1P06400 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.1■□□□□ 0.17
RB1P06400 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.1■□□□□ 0.17
RB1P06400 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.1■□□□□ 0.17
RB1P06400 AC103691.2-201ENST00000618824 433 ntBASIC16.1■□□□□ 0.17
RB1P06400 NAP1L6-202ENST00000641404 1222 ntBASIC16.1■□□□□ 0.17
RB1P06400 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RB1P06400 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.1■□□□□ 0.17
RB1P06400 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.1■□□□□ 0.17
RB1P06400 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.1■□□□□ 0.17
RB1P06400 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.1■□□□□ 0.17
RB1P06400 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RB1P06400 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RB1P06400 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.09■□□□□ 0.17
RB1P06400 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
RB1P06400 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 SHC1P1-201ENST00000425230 1745 ntBASIC16.09■□□□□ 0.17
RB1P06400 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.09■□□□□ 0.17
RB1P06400 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.09■□□□□ 0.17
RB1P06400 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 PDIA3P2-201ENST00000428073 158 ntBASIC16.09■□□□□ 0.17
RB1P06400 AC098935.1-201ENST00000446057 611 ntBASIC16.09■□□□□ 0.17
RB1P06400 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.09■□□□□ 0.17
RB1P06400 NOC2LP1-201ENST00000450578 752 ntBASIC16.09■□□□□ 0.17
RB1P06400 CEP164P1-201ENST00000455142 418 ntBASIC16.09■□□□□ 0.17
RB1P06400 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RB1P06400 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.09■□□□□ 0.17
RB1P06400 AC090857.1-201ENST00000527400 390 ntBASIC16.09■□□□□ 0.17
RB1P06400 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.09■□□□□ 0.17
RB1P06400 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.09■□□□□ 0.17
RB1P06400 MIR4783-201ENST00000580343 82 ntBASIC16.09■□□□□ 0.17
RB1P06400 RN7SL555P-201ENST00000584742 339 ntBASIC16.09■□□□□ 0.17
RB1P06400 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.09■□□□□ 0.17
RB1P06400 AC012044.1-201ENST00000603431 297 ntBASIC16.09■□□□□ 0.17
RB1P06400 COX6A1P2-201ENST00000620597 330 ntBASIC16.09■□□□□ 0.17
RB1P06400 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.09■□□□□ 0.17
RB1P06400 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RB1P06400 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RB1P06400 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
RB1P06400 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RB1P06400 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.09■□□□□ 0.17
RB1P06400 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RB1P06400 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RB1P06400 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RB1P06400 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.08■□□□□ 0.17
RB1P06400 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RB1P06400 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
RB1P06400 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RB1P06400 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RB1P06400 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.08■□□□□ 0.16
RB1P06400 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RB1P06400 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.08■□□□□ 0.16
RB1P06400 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.08■□□□□ 0.16
RB1P06400 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.08■□□□□ 0.16
RB1P06400 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.08■□□□□ 0.16
RB1P06400 AC010141.1-201ENST00000411585 623 ntBASIC16.08■□□□□ 0.16
RB1P06400 ISCA2P1-201ENST00000425548 448 ntBASIC16.08■□□□□ 0.16
RB1P06400 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RB1P06400 RPL18P13-201ENST00000478088 569 ntBASIC16.08■□□□□ 0.16
RB1P06400 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms