Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.39■□□□□ 0.53
CHGBP05060 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CHGBP05060 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.39■□□□□ 0.53
CHGBP05060 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.39■□□□□ 0.53
CHGBP05060 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.39■□□□□ 0.53
CHGBP05060 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.39■□□□□ 0.53
CHGBP05060 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CHGBP05060 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.38■□□□□ 0.53
CHGBP05060 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.38■□□□□ 0.53
CHGBP05060 RAB43P1-201ENST00000561790 589 ntBASIC18.38■□□□□ 0.53
CHGBP05060 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.38■□□□□ 0.53
CHGBP05060 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHGBP05060 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.38■□□□□ 0.53
CHGBP05060 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CHGBP05060 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHGBP05060 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.38■□□□□ 0.53
CHGBP05060 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.38■□□□□ 0.53
CHGBP05060 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHGBP05060 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHGBP05060 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHGBP05060 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.37■□□□□ 0.53
CHGBP05060 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.37■□□□□ 0.53
CHGBP05060 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CHGBP05060 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.37■□□□□ 0.53
CHGBP05060 ACTBP8-201ENST00000403258 1108 ntBASIC18.37■□□□□ 0.53
CHGBP05060 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHGBP05060 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.37■□□□□ 0.53
CHGBP05060 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.37■□□□□ 0.53
CHGBP05060 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 AC026434.2-201ENST00000506094 1078 ntBASIC18.37■□□□□ 0.53
CHGBP05060 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.37■□□□□ 0.53
CHGBP05060 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.37■□□□□ 0.53
CHGBP05060 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.37■□□□□ 0.53
CHGBP05060 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.37■□□□□ 0.53
CHGBP05060 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 KRT8P14-201ENST00000414254 1442 ntBASIC18.37■□□□□ 0.53
CHGBP05060 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.37■□□□□ 0.53
CHGBP05060 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.37■□□□□ 0.53
CHGBP05060 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.37■□□□□ 0.53
CHGBP05060 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHGBP05060 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHGBP05060 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.36■□□□□ 0.53
CHGBP05060 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
CHGBP05060 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHGBP05060 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms