Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.96□□□□□ -0.34
CD74P04233 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD74P04233 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD74P04233 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
CD74P04233 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD74P04233 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.96□□□□□ -0.34
CD74P04233 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CD74P04233 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.96□□□□□ -0.34
CD74P04233 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.34
CD74P04233 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.96□□□□□ -0.34
CD74P04233 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.96□□□□□ -0.34
CD74P04233 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CD74P04233 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 TCAF1P1-201ENST00000414990 2232 ntBASIC12.95□□□□□ -0.34
CD74P04233 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CD74P04233 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.95□□□□□ -0.34
CD74P04233 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.95□□□□□ -0.34
CD74P04233 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CD74P04233 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.95□□□□□ -0.34
CD74P04233 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.95□□□□□ -0.34
CD74P04233 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.95□□□□□ -0.34
CD74P04233 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.95□□□□□ -0.34
CD74P04233 SBF1P1-201ENST00000444527 5631 ntBASIC12.95□□□□□ -0.34
CD74P04233 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CD74P04233 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.95□□□□□ -0.34
CD74P04233 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD74P04233 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CD74P04233 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CD74P04233 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.94□□□□□ -0.34
CD74P04233 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.94□□□□□ -0.34
CD74P04233 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CD74P04233 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.94□□□□□ -0.34
CD74P04233 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.94□□□□□ -0.34
CD74P04233 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CD74P04233 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.94□□□□□ -0.34
CD74P04233 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.94□□□□□ -0.34
CD74P04233 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD74P04233 AL121912.1-201ENST00000603683 238 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms