Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND3P03897 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 CYP4F24P-201ENST00000586049 1580 ntBASIC15.76■□□□□ 0.11
MT-ND3P03897 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.76■□□□□ 0.11
MT-ND3P03897 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
MT-ND3P03897 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND3P03897 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND3P03897 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
MT-ND3P03897 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.76■□□□□ 0.11
MT-ND3P03897 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND3P03897 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.76■□□□□ 0.11
MT-ND3P03897 AL139010.1-201ENST00000454878 894 ntBASIC15.76■□□□□ 0.11
MT-ND3P03897 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND3P03897 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.76■□□□□ 0.11
MT-ND3P03897 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.76■□□□□ 0.11
MT-ND3P03897 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.76■□□□□ 0.11
MT-ND3P03897 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.76■□□□□ 0.11
MT-ND3P03897 AL158211.3-201ENST00000607385 239 ntBASIC15.76■□□□□ 0.11
MT-ND3P03897 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.76■□□□□ 0.11
MT-ND3P03897 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.76■□□□□ 0.11
MT-ND3P03897 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MT-ND3P03897 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 GRK6P1-201ENST00000400595 1711 ntBASIC15.76■□□□□ 0.11
MT-ND3P03897 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MT-ND3P03897 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.76■□□□□ 0.11
MT-ND3P03897 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.76■□□□□ 0.11
MT-ND3P03897 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND3P03897 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND3P03897 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.76■□□□□ 0.11
MT-ND3P03897 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
MT-ND3P03897 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MT-ND3P03897 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND3P03897 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
MT-ND3P03897 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.75■□□□□ 0.11
MT-ND3P03897 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MT-ND3P03897 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.75■□□□□ 0.11
MT-ND3P03897 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.75■□□□□ 0.11
MT-ND3P03897 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.75■□□□□ 0.11
MT-ND3P03897 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.75■□□□□ 0.11
MT-ND3P03897 COX20P2-201ENST00000452636 358 ntBASIC15.75■□□□□ 0.11
MT-ND3P03897 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.75■□□□□ 0.11
MT-ND3P03897 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.75■□□□□ 0.11
MT-ND3P03897 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 IGHV3-42-201ENST00000520410 361 ntBASIC15.75■□□□□ 0.11
MT-ND3P03897 AC069120.2-201ENST00000524091 540 ntBASIC15.75■□□□□ 0.11
MT-ND3P03897 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.75■□□□□ 0.11
MT-ND3P03897 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND3P03897 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.75■□□□□ 0.11
MT-ND3P03897 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MT-ND3P03897 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND3P03897 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MT-ND3P03897 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND3P03897 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
MT-ND3P03897 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND3P03897 WASH3P-207ENST00000560956 1394 ntBASIC15.75■□□□□ 0.11
MT-ND3P03897 FO538757.1-201ENST00000623083 1397 ntBASIC15.75■□□□□ 0.11
MT-ND3P03897 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND3P03897 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
MT-ND3P03897 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-ND3P03897 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MT-ND3P03897 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.74■□□□□ 0.11
MT-ND3P03897 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
MT-ND3P03897 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
MT-ND3P03897 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms