Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL607033.1-201ENST00000623900 1599 ntBASIC14.6□□□□□ -0.07
MT-ND1P03886 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MT-ND1P03886 WASH3P-207ENST00000560956 1394 ntBASIC14.6□□□□□ -0.07
MT-ND1P03886 FO538757.1-201ENST00000623083 1397 ntBASIC14.6□□□□□ -0.07
MT-ND1P03886 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MT-ND1P03886 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
MT-ND1P03886 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.59□□□□□ -0.07
MT-ND1P03886 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.59□□□□□ -0.07
MT-ND1P03886 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.59□□□□□ -0.07
MT-ND1P03886 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
MT-ND1P03886 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
MT-ND1P03886 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.59□□□□□ -0.07
MT-ND1P03886 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
MT-ND1P03886 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.59□□□□□ -0.07
MT-ND1P03886 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.59□□□□□ -0.07
MT-ND1P03886 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.59□□□□□ -0.07
MT-ND1P03886 RN7SL589P-201ENST00000481268 310 ntBASIC14.59□□□□□ -0.07
MT-ND1P03886 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.59□□□□□ -0.07
MT-ND1P03886 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.59□□□□□ -0.07
MT-ND1P03886 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.59□□□□□ -0.07
MT-ND1P03886 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.59□□□□□ -0.07
MT-ND1P03886 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
MT-ND1P03886 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.59□□□□□ -0.07
MT-ND1P03886 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.59□□□□□ -0.07
MT-ND1P03886 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.59□□□□□ -0.07
MT-ND1P03886 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
MT-ND1P03886 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
MT-ND1P03886 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
MT-ND1P03886 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.59□□□□□ -0.07
MT-ND1P03886 AP000845.1-201ENST00000581677 2131 ntBASIC14.59□□□□□ -0.07
MT-ND1P03886 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.59□□□□□ -0.07
MT-ND1P03886 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.59□□□□□ -0.07
MT-ND1P03886 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MT-ND1P03886 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
MT-ND1P03886 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
MT-ND1P03886 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.58□□□□□ -0.07
MT-ND1P03886 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
MT-ND1P03886 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
MT-ND1P03886 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
MT-ND1P03886 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.58□□□□□ -0.08
MT-ND1P03886 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
MT-ND1P03886 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.58□□□□□ -0.08
MT-ND1P03886 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.58□□□□□ -0.08
MT-ND1P03886 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
MT-ND1P03886 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.58□□□□□ -0.08
MT-ND1P03886 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.58□□□□□ -0.08
MT-ND1P03886 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.58□□□□□ -0.08
MT-ND1P03886 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
MT-ND1P03886 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.58□□□□□ -0.08
MT-ND1P03886 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.58□□□□□ -0.08
MT-ND1P03886 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
MT-ND1P03886 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.58□□□□□ -0.08
MT-ND1P03886 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.58□□□□□ -0.08
MT-ND1P03886 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
MT-ND1P03886 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MT-ND1P03886 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms