Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFBP01127 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PDGFBP01127 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFBP01127 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.22■□□□□ 0.03
PDGFBP01127 AL627422.1-201ENST00000434104 580 ntBASIC15.22■□□□□ 0.03
PDGFBP01127 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.22■□□□□ 0.03
PDGFBP01127 TMCO5B-205ENST00000530020 894 ntBASIC15.22■□□□□ 0.03
PDGFBP01127 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFBP01127 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 DUX4L47-201ENST00000566374 394 ntBASIC15.22■□□□□ 0.03
PDGFBP01127 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.22■□□□□ 0.03
PDGFBP01127 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.22■□□□□ 0.03
PDGFBP01127 AL157813.1-201ENST00000612996 587 ntBASIC15.22■□□□□ 0.03
PDGFBP01127 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFBP01127 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PDGFBP01127 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.22■□□□□ 0.03
PDGFBP01127 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PDGFBP01127 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PDGFBP01127 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PDGFBP01127 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PDGFBP01127 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PDGFBP01127 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFBP01127 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFBP01127 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 AC015909.3-201ENST00000572855 1794 ntBASIC15.21■□□□□ 0.03
PDGFBP01127 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PDGFBP01127 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PDGFBP01127 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.21■□□□□ 0.03
PDGFBP01127 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.21■□□□□ 0.03
PDGFBP01127 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.21■□□□□ 0.03
PDGFBP01127 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.21■□□□□ 0.03
PDGFBP01127 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.21■□□□□ 0.03
PDGFBP01127 AC078875.1-201ENST00000431907 724 ntBASIC15.21■□□□□ 0.03
PDGFBP01127 FAM58BP-201ENST00000439056 645 ntBASIC15.21■□□□□ 0.03
PDGFBP01127 AC012441.2-201ENST00000444843 739 ntBASIC15.21■□□□□ 0.03
PDGFBP01127 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.21■□□□□ 0.03
PDGFBP01127 LYPLA2P1-203ENST00000447689 696 ntBASIC15.21■□□□□ 0.03
PDGFBP01127 AP000358.1-201ENST00000456260 156 ntBASIC15.21■□□□□ 0.03
PDGFBP01127 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.21■□□□□ 0.03
PDGFBP01127 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.21■□□□□ 0.03
PDGFBP01127 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.21■□□□□ 0.03
PDGFBP01127 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.21■□□□□ 0.03
PDGFBP01127 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PDGFBP01127 AL118516.1-201ENST00000564152 670 ntBASIC15.21■□□□□ 0.03
PDGFBP01127 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PDGFBP01127 AC025262.2-201ENST00000623975 1056 ntBASIC15.21■□□□□ 0.03
PDGFBP01127 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.21■□□□□ 0.03
PDGFBP01127 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.21■□□□□ 0.03
PDGFBP01127 IL9RP3-201ENST00000442856 1674 ntBASIC15.21■□□□□ 0.03
PDGFBP01127 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFBP01127 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PDGFBP01127 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
PDGFBP01127 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.21■□□□□ 0.02
PDGFBP01127 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PDGFBP01127 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDGFBP01127 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.2■□□□□ 0.02
PDGFBP01127 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 AC012313.1-201ENST00000593393 3059 ntBASIC15.2■□□□□ 0.02
PDGFBP01127 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.2■□□□□ 0.02
PDGFBP01127 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PDGFBP01127 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 FRMPD2B-201ENST00000431305 1347 ntBASIC15.2■□□□□ 0.02
PDGFBP01127 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.2■□□□□ 0.02
PDGFBP01127 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PDGFBP01127 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFBP01127 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PDGFBP01127 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PDGFBP01127 AC079328.2-201ENST00000561241 3354 ntBASIC15.2■□□□□ 0.02
PDGFBP01127 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.2■□□□□ 0.02
PDGFBP01127 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms