Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
MT-CO1P00395 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.79■□□□□ 0.12
MT-CO1P00395 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.79■□□□□ 0.12
MT-CO1P00395 AC107373.2-201ENST00000607735 490 ntBASIC15.79■□□□□ 0.12
MT-CO1P00395 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.79■□□□□ 0.12
MT-CO1P00395 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-CO1P00395 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MT-CO1P00395 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-CO1P00395 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.79■□□□□ 0.12
MT-CO1P00395 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-CO1P00395 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-CO1P00395 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-CO1P00395 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-CO1P00395 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.79■□□□□ 0.12
MT-CO1P00395 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-CO1P00395 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.79■□□□□ 0.12
MT-CO1P00395 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
MT-CO1P00395 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MT-CO1P00395 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
MT-CO1P00395 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-CO1P00395 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.78■□□□□ 0.12
MT-CO1P00395 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.78■□□□□ 0.12
MT-CO1P00395 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-CO1P00395 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-CO1P00395 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.78■□□□□ 0.12
MT-CO1P00395 CLUHP6-201ENST00000580789 941 ntBASIC15.78■□□□□ 0.12
MT-CO1P00395 AC008735.3-201ENST00000596646 500 ntBASIC15.78■□□□□ 0.12
MT-CO1P00395 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.78■□□□□ 0.12
MT-CO1P00395 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.78■□□□□ 0.12
MT-CO1P00395 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
MT-CO1P00395 TNRC18P2-201ENST00000417666 2714 ntBASIC15.78■□□□□ 0.12
MT-CO1P00395 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.78■□□□□ 0.12
MT-CO1P00395 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MT-CO1P00395 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
MT-CO1P00395 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
MT-CO1P00395 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
MT-CO1P00395 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.77■□□□□ 0.12
MT-CO1P00395 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
MT-CO1P00395 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.77■□□□□ 0.12
MT-CO1P00395 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.77■□□□□ 0.12
MT-CO1P00395 GK-202ENST00000378941 458 ntTSL 3 BASIC15.77■□□□□ 0.12
MT-CO1P00395 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
MT-CO1P00395 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.77■□□□□ 0.12
MT-CO1P00395 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.77■□□□□ 0.12
MT-CO1P00395 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.77■□□□□ 0.12
MT-CO1P00395 ENPP7P5-201ENST00000541031 1031 ntBASIC15.77■□□□□ 0.12
MT-CO1P00395 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.77■□□□□ 0.12
MT-CO1P00395 AC005252.2-201ENST00000624630 1141 ntBASIC15.77■□□□□ 0.12
MT-CO1P00395 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.77■□□□□ 0.12
MT-CO1P00395 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-CO1P00395 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
MT-CO1P00395 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.77■□□□□ 0.11
MT-CO1P00395 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-CO1P00395 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
MT-CO1P00395 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
MT-CO1P00395 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-CO1P00395 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
MT-CO1P00395 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
MT-CO1P00395 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-CO1P00395 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-CO1P00395 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
MT-CO1P00395 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms