Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX3O95343 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SIX3O95343 AC015656.1-201ENST00000624209 3578 ntBASIC15.07■□□□□ 0
SIX3O95343 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX3O95343 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX3O95343 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SIX3O95343 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
SIX3O95343 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SIX3O95343 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.07■□□□□ 0
SIX3O95343 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SIX3O95343 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.07■□□□□ 0
SIX3O95343 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SIX3O95343 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 MYO15B-237ENST00000642007 4893 ntBASIC15.06■□□□□ 0
SIX3O95343 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SIX3O95343 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
SIX3O95343 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
SIX3O95343 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SIX3O95343 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
SIX3O95343 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.06■□□□□ 0
SIX3O95343 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.06■□□□□ 0
SIX3O95343 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.06■□□□□ 0
SIX3O95343 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.06■□□□□ 0
SIX3O95343 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.06■□□□□ 0
SIX3O95343 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 AC140878.1-201ENST00000565277 250 ntBASIC15.06■□□□□ 0
SIX3O95343 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.06■□□□□ 0
SIX3O95343 LINC02084-201ENST00000606069 1096 ntBASIC15.06■□□□□ 0
SIX3O95343 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.06■□□□□ 0
SIX3O95343 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 AC018529.2-202ENST00000611482 3087 ntBASIC15.06■□□□□ 0
SIX3O95343 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 AC126755.1-201ENST00000525846 6405 ntBASIC15.06■□□□□ 0
SIX3O95343 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SIX3O95343 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SIX3O95343 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SIX3O95343 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SIX3O95343 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SIX3O95343 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
SIX3O95343 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.06■□□□□ 0
SIX3O95343 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.05■□□□□ 0
SIX3O95343 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
SIX3O95343 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SIX3O95343 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SIX3O95343 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.05■□□□□ 0
SIX3O95343 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.05■□□□□ 0
SIX3O95343 MTHFR-210ENST00000641407 2387 ntBASIC15.05■□□□□ 0
SIX3O95343 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.05■□□□□ 0
SIX3O95343 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SIX3O95343 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SIX3O95343 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIX3O95343 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIX3O95343 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.05■□□□□ -0
SIX3O95343 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SIX3O95343 TREML5P-201ENST00000421694 576 ntBASIC15.05■□□□□ -0
SIX3O95343 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.05■□□□□ -0
SIX3O95343 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.05■□□□□ -0
SIX3O95343 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.05■□□□□ -0
SIX3O95343 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.05■□□□□ -0
SIX3O95343 AC097493.3-201ENST00000509725 367 ntBASIC15.05■□□□□ -0
SIX3O95343 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.05■□□□□ -0
SIX3O95343 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.05■□□□□ -0
SIX3O95343 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.05■□□□□ -0
SIX3O95343 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.05■□□□□ -0
SIX3O95343 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.05■□□□□ -0
SIX3O95343 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.05■□□□□ -0
SIX3O95343 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.05■□□□□ -0
SIX3O95343 AC087499.5-201ENST00000452760 1342 ntBASIC15.05■□□□□ -0
SIX3O95343 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SIX3O95343 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.05■□□□□ -0
SIX3O95343 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.05■□□□□ -0
SIX3O95343 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SIX3O95343 AC012508.2-201ENST00000567613 1472 ntBASIC15.05■□□□□ -0
SIX3O95343 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.05■□□□□ -0
SIX3O95343 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIX3O95343 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIX3O95343 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.05■□□□□ -0
SIX3O95343 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SIX3O95343 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.05■□□□□ -0
SIX3O95343 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms