Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTNND1O60716 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CTNND1O60716 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTNND1O60716 AC138649.2-201ENST00000615886 705 ntBASIC17.85■□□□□ 0.45
CTNND1O60716 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.85■□□□□ 0.45
CTNND1O60716 AC055811.4-201ENST00000624039 1754 ntBASIC17.85■□□□□ 0.45
CTNND1O60716 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.85■□□□□ 0.45
CTNND1O60716 AC138627.1-207ENST00000641560 1006 ntBASIC17.85■□□□□ 0.45
CTNND1O60716 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
CTNND1O60716 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTNND1O60716 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTNND1O60716 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CTNND1O60716 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTNND1O60716 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.84■□□□□ 0.45
CTNND1O60716 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CTNND1O60716 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.84■□□□□ 0.45
CTNND1O60716 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.84■□□□□ 0.45
CTNND1O60716 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 CLUHP2-201ENST00000426660 1303 ntBASIC17.84■□□□□ 0.45
CTNND1O60716 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CTNND1O60716 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.84■□□□□ 0.45
CTNND1O60716 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.84■□□□□ 0.45
CTNND1O60716 EIF4HP1-201ENST00000453115 687 ntBASIC17.84■□□□□ 0.45
CTNND1O60716 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 MESTP3-201ENST00000503460 968 ntBASIC17.84■□□□□ 0.45
CTNND1O60716 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.84■□□□□ 0.45
CTNND1O60716 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CTNND1O60716 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.84■□□□□ 0.45
CTNND1O60716 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
CTNND1O60716 CYP2T1P-202ENST00000641596 2535 ntBASIC17.84■□□□□ 0.45
CTNND1O60716 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.84■□□□□ 0.45
CTNND1O60716 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CTNND1O60716 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.84■□□□□ 0.45
CTNND1O60716 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTNND1O60716 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CTNND1O60716 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTNND1O60716 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTNND1O60716 HYMAI-201ENST00000635591 3347 ntBASIC17.83■□□□□ 0.45
CTNND1O60716 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.45
CTNND1O60716 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.83■□□□□ 0.45
CTNND1O60716 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
CTNND1O60716 LINC00554-201ENST00000564841 3011 ntBASIC17.83■□□□□ 0.45
CTNND1O60716 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTNND1O60716 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.83■□□□□ 0.45
CTNND1O60716 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTNND1O60716 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.83■□□□□ 0.45
CTNND1O60716 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CTNND1O60716 AC026691.1-201ENST00000602502 2017 ntBASIC17.83■□□□□ 0.45
CTNND1O60716 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTNND1O60716 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CTNND1O60716 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTNND1O60716 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTNND1O60716 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTNND1O60716 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTNND1O60716 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTNND1O60716 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTNND1O60716 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.83■□□□□ 0.44
CTNND1O60716 UPF3AP2-201ENST00000457924 1132 ntBASIC17.83■□□□□ 0.44
CTNND1O60716 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
CTNND1O60716 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CTNND1O60716 AC005730.2-201ENST00000564549 1184 ntBASIC17.83■□□□□ 0.44
CTNND1O60716 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.83■□□□□ 0.44
CTNND1O60716 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.83■□□□□ 0.44
CTNND1O60716 AC015967.2-201ENST00000624092 234 ntBASIC17.83■□□□□ 0.44
CTNND1O60716 AC006435.4-201ENST00000625037 234 ntBASIC17.83■□□□□ 0.44
CTNND1O60716 AL356737.1-201ENST00000634391 234 ntBASIC17.83■□□□□ 0.44
CTNND1O60716 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.83■□□□□ 0.44
CTNND1O60716 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTNND1O60716 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.83■□□□□ 0.44
CTNND1O60716 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CTNND1O60716 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTNND1O60716 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTNND1O60716 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
CTNND1O60716 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTNND1O60716 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms