Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SORBS3O60504 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SORBS3O60504 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SORBS3O60504 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.29■□□□□ 0.36
SORBS3O60504 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.29■□□□□ 0.36
SORBS3O60504 CNN2P8-201ENST00000421872 913 ntBASIC17.29■□□□□ 0.36
SORBS3O60504 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 RNA5SP412-201ENST00000516234 123 ntBASIC17.29■□□□□ 0.36
SORBS3O60504 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.29■□□□□ 0.36
SORBS3O60504 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.29■□□□□ 0.36
SORBS3O60504 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.29■□□□□ 0.36
SORBS3O60504 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.29■□□□□ 0.36
SORBS3O60504 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
SORBS3O60504 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SORBS3O60504 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SORBS3O60504 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.29■□□□□ 0.36
SORBS3O60504 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SORBS3O60504 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SORBS3O60504 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SORBS3O60504 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SORBS3O60504 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 AC007787.1-201ENST00000588095 1583 ntBASIC17.28■□□□□ 0.36
SORBS3O60504 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.28■□□□□ 0.36
SORBS3O60504 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 LRRC59-203ENST00000576448 1531 ntBASIC17.28■□□□□ 0.36
SORBS3O60504 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
SORBS3O60504 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.28■□□□□ 0.36
SORBS3O60504 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.28■□□□□ 0.36
SORBS3O60504 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.28■□□□□ 0.36
SORBS3O60504 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.28■□□□□ 0.36
SORBS3O60504 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.28■□□□□ 0.36
SORBS3O60504 RN7SL560P-201ENST00000577943 264 ntBASIC17.28■□□□□ 0.36
SORBS3O60504 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
SORBS3O60504 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SORBS3O60504 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SORBS3O60504 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SORBS3O60504 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SORBS3O60504 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.28■□□□□ 0.36
SORBS3O60504 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.28■□□□□ 0.36
SORBS3O60504 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SORBS3O60504 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.27■□□□□ 0.36
SORBS3O60504 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.27■□□□□ 0.36
SORBS3O60504 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SORBS3O60504 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.27■□□□□ 0.36
SORBS3O60504 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.27■□□□□ 0.36
SORBS3O60504 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SORBS3O60504 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SORBS3O60504 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.27■□□□□ 0.36
SORBS3O60504 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SORBS3O60504 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SORBS3O60504 AC099548.2-209ENST00000480264 625 ntBASIC17.27■□□□□ 0.36
SORBS3O60504 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.27■□□□□ 0.36
SORBS3O60504 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.27■□□□□ 0.36
SORBS3O60504 FAM8A2P-201ENST00000528813 1142 ntBASIC17.27■□□□□ 0.36
SORBS3O60504 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.27■□□□□ 0.36
SORBS3O60504 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.27■□□□□ 0.36
SORBS3O60504 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.27■□□□□ 0.36
SORBS3O60504 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SORBS3O60504 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SORBS3O60504 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SORBS3O60504 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.27■□□□□ 0.35
SORBS3O60504 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SORBS3O60504 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.27■□□□□ 0.35
SORBS3O60504 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SORBS3O60504 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.27■□□□□ 0.35
SORBS3O60504 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.27■□□□□ 0.35
SORBS3O60504 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SORBS3O60504 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SORBS3O60504 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.27■□□□□ 0.35
SORBS3O60504 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SORBS3O60504 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms