Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN5O00501 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN5O00501 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CLDN5O00501 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN5O00501 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLDN5O00501 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN5O00501 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN5O00501 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLDN5O00501 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN5O00501 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CLDN5O00501 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN5O00501 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN5O00501 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 ACTBP8-201ENST00000403258 1108 ntBASIC16.17■□□□□ 0.18
CLDN5O00501 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN5O00501 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN5O00501 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN5O00501 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN5O00501 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN5O00501 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN5O00501 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN5O00501 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.17■□□□□ 0.18
CLDN5O00501 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CLDN5O00501 AC126365.1-201ENST00000578585 1514 ntBASIC16.17■□□□□ 0.18
CLDN5O00501 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLDN5O00501 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN5O00501 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLDN5O00501 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN5O00501 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLDN5O00501 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN5O00501 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN5O00501 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN5O00501 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN5O00501 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN5O00501 AP000845.1-201ENST00000581677 2131 ntBASIC16.16■□□□□ 0.18
CLDN5O00501 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN5O00501 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 LRRC59-203ENST00000576448 1531 ntBASIC16.16■□□□□ 0.18
CLDN5O00501 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN5O00501 AL138709.1-201ENST00000614840 1693 ntBASIC16.16■□□□□ 0.18
CLDN5O00501 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 AL645937.2-201ENST00000396808 931 ntBASIC16.16■□□□□ 0.18
CLDN5O00501 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 AC016694.1-201ENST00000434179 700 ntBASIC16.16■□□□□ 0.18
CLDN5O00501 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 AC104989.1-201ENST00000519711 778 ntBASIC16.16■□□□□ 0.18
CLDN5O00501 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN5O00501 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN5O00501 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN5O00501 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN5O00501 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN5O00501 KRT8P14-201ENST00000414254 1442 ntBASIC16.16■□□□□ 0.18
CLDN5O00501 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLDN5O00501 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.16■□□□□ 0.18
CLDN5O00501 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.16■□□□□ 0.18
CLDN5O00501 AL109954.1-202ENST00000564051 2148 ntBASIC16.16■□□□□ 0.18
CLDN5O00501 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN5O00501 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN5O00501 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN5O00501 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN5O00501 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CLDN5O00501 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN5O00501 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN5O00501 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN5O00501 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN5O00501 AC092384.3-202ENST00000564646 2873 ntBASIC16.16■□□□□ 0.18
CLDN5O00501 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN5O00501 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN5O00501 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN5O00501 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN5O00501 AP002414.2-201ENST00000591780 3365 ntBASIC16.15■□□□□ 0.18
CLDN5O00501 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLDN5O00501 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN5O00501 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN5O00501 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN5O00501 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN5O00501 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN5O00501 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN5O00501 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms