Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.75□□□□□ -0.05
PDLIM1O00151 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.75□□□□□ -0.05
PDLIM1O00151 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PDLIM1O00151 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.75□□□□□ -0.05
PDLIM1O00151 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PDLIM1O00151 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PDLIM1O00151 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.75□□□□□ -0.05
PDLIM1O00151 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PDLIM1O00151 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.75□□□□□ -0.05
PDLIM1O00151 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.75□□□□□ -0.05
PDLIM1O00151 ALG1L5P-201ENST00000482043 771 ntBASIC14.75□□□□□ -0.05
PDLIM1O00151 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.75□□□□□ -0.05
PDLIM1O00151 AC109635.5-201ENST00000533593 962 ntBASIC14.75□□□□□ -0.05
PDLIM1O00151 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.75□□□□□ -0.05
PDLIM1O00151 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.75□□□□□ -0.05
PDLIM1O00151 AC091812.2-201ENST00000619081 385 ntBASIC14.75□□□□□ -0.05
PDLIM1O00151 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.75□□□□□ -0.05
PDLIM1O00151 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PDLIM1O00151 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PDLIM1O00151 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 AL589702.1-201ENST00000641229 1509 ntBASIC14.75□□□□□ -0.05
PDLIM1O00151 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.75□□□□□ -0.05
PDLIM1O00151 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.75□□□□□ -0.05
PDLIM1O00151 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.75□□□□□ -0.05
PDLIM1O00151 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PDLIM1O00151 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PDLIM1O00151 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PDLIM1O00151 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.75□□□□□ -0.05
PDLIM1O00151 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.74□□□□□ -0.05
PDLIM1O00151 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
PDLIM1O00151 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PDLIM1O00151 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PDLIM1O00151 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PDLIM1O00151 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 PMS2P4-201ENST00000412466 1052 ntBASIC14.74□□□□□ -0.05
PDLIM1O00151 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.74□□□□□ -0.05
PDLIM1O00151 HTR5BP-201ENST00000430851 1154 ntBASIC14.74□□□□□ -0.05
PDLIM1O00151 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.74□□□□□ -0.05
PDLIM1O00151 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.74□□□□□ -0.05
PDLIM1O00151 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 AC005829.1-201ENST00000570002 483 ntBASIC14.74□□□□□ -0.05
PDLIM1O00151 MIR3687-2-201ENST00000577708 61 ntBASIC14.74□□□□□ -0.05
PDLIM1O00151 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.74□□□□□ -0.05
PDLIM1O00151 MIR3687-1-201ENST00000614492 61 ntBASIC14.74□□□□□ -0.05
PDLIM1O00151 AC092902.6-201ENST00000641783 218 ntBASIC14.74□□□□□ -0.05
PDLIM1O00151 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.74□□□□□ -0.05
PDLIM1O00151 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.74□□□□□ -0.05
PDLIM1O00151 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.74□□□□□ -0.05
PDLIM1O00151 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.74□□□□□ -0.05
PDLIM1O00151 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.74□□□□□ -0.05
PDLIM1O00151 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PDLIM1O00151 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PDLIM1O00151 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
PDLIM1O00151 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PDLIM1O00151 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.73□□□□□ -0.05
PDLIM1O00151 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PDLIM1O00151 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms