Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX39AO00148 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX39AO00148 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
DDX39AO00148 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX39AO00148 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX39AO00148 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DDX39AO00148 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX39AO00148 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DDX39AO00148 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX39AO00148 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX39AO00148 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
DDX39AO00148 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
DDX39AO00148 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
DDX39AO00148 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
DDX39AO00148 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
DDX39AO00148 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX39AO00148 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DDX39AO00148 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.27■□□□□ 0.36
DDX39AO00148 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.27■□□□□ 0.36
DDX39AO00148 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.27■□□□□ 0.36
DDX39AO00148 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX39AO00148 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX39AO00148 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.27■□□□□ 0.36
DDX39AO00148 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.27■□□□□ 0.36
DDX39AO00148 BOLA2P3-201ENST00000404566 256 ntBASIC17.27■□□□□ 0.36
DDX39AO00148 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
DDX39AO00148 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DDX39AO00148 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DDX39AO00148 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.27■□□□□ 0.36
DDX39AO00148 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DDX39AO00148 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.27■□□□□ 0.36
DDX39AO00148 COX11-210ENST00000639671 696 ntBASIC17.27■□□□□ 0.36
DDX39AO00148 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX39AO00148 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX39AO00148 MST1L-201ENST00000442552 2185 ntBASIC17.27■□□□□ 0.36
DDX39AO00148 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
DDX39AO00148 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DDX39AO00148 AP002414.2-201ENST00000591780 3365 ntBASIC17.27■□□□□ 0.35
DDX39AO00148 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.27■□□□□ 0.35
DDX39AO00148 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
DDX39AO00148 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DDX39AO00148 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
DDX39AO00148 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.27■□□□□ 0.35
DDX39AO00148 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.27■□□□□ 0.35
DDX39AO00148 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
DDX39AO00148 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 AC063926.3-201ENST00000624734 5658 ntBASIC17.26■□□□□ 0.35
DDX39AO00148 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.26■□□□□ 0.35
DDX39AO00148 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.26■□□□□ 0.35
DDX39AO00148 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.26■□□□□ 0.35
DDX39AO00148 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.26■□□□□ 0.35
DDX39AO00148 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
DDX39AO00148 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX39AO00148 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DDX39AO00148 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
DDX39AO00148 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
DDX39AO00148 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
DDX39AO00148 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX39AO00148 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 AC016694.1-201ENST00000434179 700 ntBASIC17.26■□□□□ 0.35
DDX39AO00148 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.26■□□□□ 0.35
DDX39AO00148 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX39AO00148 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX39AO00148 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX39AO00148 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX39AO00148 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX39AO00148 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
DDX39AO00148 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.26■□□□□ 0.35
DDX39AO00148 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.26■□□□□ 0.35
DDX39AO00148 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
DDX39AO00148 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DDX39AO00148 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.26■□□□□ 0.35
DDX39AO00148 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DDX39AO00148 AC105917.1-201ENST00000506637 2539 ntBASIC17.25■□□□□ 0.35
DDX39AO00148 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.25■□□□□ 0.35
DDX39AO00148 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.25■□□□□ 0.35
DDX39AO00148 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DDX39AO00148 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
DDX39AO00148 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms