Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.42□□□□□ -0.42
SRRM4A7MD48 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.42□□□□□ -0.42
SRRM4A7MD48 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SRRM4A7MD48 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 CICP14-201ENST00000629111 2732 ntBASIC12.41□□□□□ -0.42
SRRM4A7MD48 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 AC023908.3-201ENST00000564211 3047 ntBASIC12.41□□□□□ -0.42
SRRM4A7MD48 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.41□□□□□ -0.42
SRRM4A7MD48 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 AC104457.1-201ENST00000401024 814 ntBASIC12.41□□□□□ -0.42
SRRM4A7MD48 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 IGHV3-42-201ENST00000520410 361 ntBASIC12.41□□□□□ -0.42
SRRM4A7MD48 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 AC092337.1-201ENST00000568699 1129 ntBASIC12.41□□□□□ -0.42
SRRM4A7MD48 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 AC000095.1-201ENST00000603208 874 ntBASIC12.41□□□□□ -0.42
SRRM4A7MD48 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.41□□□□□ -0.42
SRRM4A7MD48 AL390755.1-201ENST00000623716 2027 ntBASIC12.41□□□□□ -0.42
SRRM4A7MD48 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.41□□□□□ -0.42
SRRM4A7MD48 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SRRM4A7MD48 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 AL009178.2-201ENST00000597278 2719 ntBASIC12.4□□□□□ -0.42
SRRM4A7MD48 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms