Protein–RNA interactions for Protein: A6NLU5

VSTM2B, V-set and transmembrane domain-containing protein 2B, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2BA6NLU5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VSTM2BA6NLU5 AC007326.2-201ENST00000624224 7579 ntBASIC14.4□□□□□ -0.1
VSTM2BA6NLU5 AL158070.2-201ENST00000623713 1621 ntBASIC14.4□□□□□ -0.1
VSTM2BA6NLU5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
VSTM2BA6NLU5 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.4□□□□□ -0.1
VSTM2BA6NLU5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VSTM2BA6NLU5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSTM2BA6NLU5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSTM2BA6NLU5 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSTM2BA6NLU5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 AC090616.6-203ENST00000579186 1945 ntBASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 AC006001.1-201ENST00000325130 474 ntBASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
VSTM2BA6NLU5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 AC026954.1-201ENST00000429771 1293 ntBASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 AC008687.7-202ENST00000637404 953 ntBASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.38□□□□□ -0.11
VSTM2BA6NLU5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms