Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 SPDYE7P-202ENST00000420373 878 ntBASIC13.81□□□□□ -0.2
TVP23AA6NH52 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 MIR6069-201ENST00000620069 79 ntBASIC13.81□□□□□ -0.2
TVP23AA6NH52 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 WASH3P-207ENST00000560956 1394 ntBASIC13.81□□□□□ -0.2
TVP23AA6NH52 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 FO538757.1-201ENST00000623083 1397 ntBASIC13.81□□□□□ -0.2
TVP23AA6NH52 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 AC139749.1-202ENST00000617529 3139 ntBASIC13.81□□□□□ -0.2
TVP23AA6NH52 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.81□□□□□ -0.2
TVP23AA6NH52 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TVP23AA6NH52 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 AL080243.2-201ENST00000418783 582 ntBASIC13.8□□□□□ -0.2
TVP23AA6NH52 CNN2P11-201ENST00000429351 262 ntBASIC13.8□□□□□ -0.2
TVP23AA6NH52 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 SLED1-202ENST00000512051 380 ntBASIC13.8□□□□□ -0.2
TVP23AA6NH52 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 LINC00628-201ENST00000628516 1289 ntBASIC13.8□□□□□ -0.2
TVP23AA6NH52 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 AC007292.2-201ENST00000593524 1812 ntBASIC13.8□□□□□ -0.2
TVP23AA6NH52 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.8□□□□□ -0.2
TVP23AA6NH52 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TVP23AA6NH52 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TVP23AA6NH52 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TVP23AA6NH52 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TVP23AA6NH52 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TVP23AA6NH52 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TVP23AA6NH52 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms