Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 AC015656.1-201ENST00000624209 3578 ntBASIC15.66■□□□□ 0.1
CCDC78A2IDD5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 AL589987.1-201ENST00000453380 819 ntBASIC15.66■□□□□ 0.1
CCDC78A2IDD5 SDHAP3-202ENST00000515467 728 ntBASIC15.66■□□□□ 0.1
CCDC78A2IDD5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC78A2IDD5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 AL121723.1-201ENST00000445194 1519 ntBASIC15.65■□□□□ 0.1
CCDC78A2IDD5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 AC055876.3-201ENST00000431496 288 ntBASIC15.65■□□□□ 0.1
CCDC78A2IDD5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 AC093214.1-201ENST00000511688 1107 ntBASIC15.65■□□□□ 0.1
CCDC78A2IDD5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC78A2IDD5 AC009407.1-201ENST00000568958 598 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms