Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 AL354877.1-201ENST00000424412 413 ntBASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 HIST2H2BB-201ENST00000449108 381 ntBASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 AC005740.2-201ENST00000511085 419 ntBASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 CHMP4BP1-201ENST00000556017 588 ntBASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 AC091544.8-201ENST00000619490 361 ntBASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 AL023803.2-201ENST00000620080 638 ntBASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC187A0A096LP49 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 AL136309.1-201ENST00000403917 691 ntBASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 HINT2P1-201ENST00000419438 481 ntBASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 Z97180.1-201ENST00000445173 988 ntBASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 SPTLC1P5-201ENST00000450718 252 ntBASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 AC021723.1-201ENST00000486306 515 ntBASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 AC106820.3-201ENST00000561653 397 ntBASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms