Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 STK26-204ENST00000481105 1835 ntTSL 2 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 RN7SL81P-201ENST00000493781 261 ntBASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 AC008723.1-201ENST00000506922 207 ntBASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 AC073911.3-201ENST00000624401 631 ntBASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPBQ9Y5S2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 AC005041.3-201ENST00000606287 649 ntBASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPBQ9Y5S2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 BID-213ENST00000615414 2236 ntTSL 5 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 MBP-201ENST00000354542 575 ntTSL 2 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 AC130709.1-201ENST00000484779 1212 ntBASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 AL031713.1-201ENST00000564813 661 ntBASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 AC007292.2-201ENST00000593524 1812 ntBASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 REXO1L2P-201ENST00000425429 2069 ntBASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 SALL4P5-201ENST00000419001 1760 ntBASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 AL513523.2-202ENST00000427283 2040 ntBASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC42BPBQ9Y5S2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 AC027601.3-201ENST00000622907 509 ntBASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms