Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 AC015936.2-201ENST00000593177 259 ntBASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 AC008735.3-201ENST00000596646 500 ntBASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 AL162274.1-201ENST00000617191 1098 ntBASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL4A3BPQ9Y5P4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.21■□□□□ 0.34
COL4A3BPQ9Y5P4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL4A3BPQ9Y5P4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL4A3BPQ9Y5P4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL4A3BPQ9Y5P4 AC148477.4-201ENST00000613430 1793 ntBASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 ENPP7P5-201ENST00000541031 1031 ntBASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 AC106886.1-201ENST00000568660 600 ntBASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 AL645728.2-202ENST00000641679 227 ntBASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 AC023824.1-201ENST00000562945 2975 ntBASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 DRD5P1-201ENST00000456605 1438 ntBASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
COL4A3BPQ9Y5P4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 TCAF2P1-201ENST00000291129 2421 ntBASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 AC244107.1-201ENST00000442033 332 ntBASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 AC026410.3-201ENST00000514280 936 ntBASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 KRT17P8-201ENST00000540749 863 ntBASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 HILS1-202ENST00000545329 423 ntBASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL4A3BPQ9Y5P4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms