Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 AL139094.1-201ENST00000405549 1188 ntBASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 AC093433.1-201ENST00000458048 571 ntBASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 RN7SL837P-201ENST00000463010 287 ntBASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 AC011495.1-201ENST00000498085 584 ntBASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 AC010319.3-201ENST00000597028 470 ntBASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 ACE3P-201ENST00000423435 1973 ntBASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 ACTG1P3-201ENST00000431775 1114 ntBASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 AC114812.1-204ENST00000449669 728 ntBASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHA4Q9UN74 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHA4Q9UN74 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms