Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 AL358472.3-201ENST00000608147 415 ntBASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 GPR182-203ENST00000622922 591 ntBASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 AC007950.2-201ENST00000615045 2347 ntBASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 AC099548.2-209ENST00000480264 625 ntBASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 AC100850.1-201ENST00000506768 649 ntBASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 MIR3615-201ENST00000581999 87 ntBASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 AL023803.2-201ENST00000620080 638 ntBASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 AC244452.3-201ENST00000636814 210 ntBASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 AC002472.3-201ENST00000640124 621 ntBASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPO2Q9UMS6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 AC136621.1-201ENST00000624017 2304 ntBASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 BX088702.1-201ENST00000610784 235 ntBASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 AC003102.2-201ENST00000589195 1469 ntBASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 AC138028.6-201ENST00000616106 1482 ntBASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.48■□□□□ 0.39
SYNPO2Q9UMS6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 AC018735.1-201ENST00000437208 1502 ntBASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 AC011840.2-201ENST00000563063 1520 ntBASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.47■□□□□ 0.39
SYNPO2Q9UMS6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms