Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 TMBIM7P-203ENST00000641617 1718 ntBASIC17.24■□□□□ 0.35
COL20A1Q9P218 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.24■□□□□ 0.35
COL20A1Q9P218 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL20A1Q9P218 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 INE2-201ENST00000630399 1874 ntBASIC17.23■□□□□ 0.35
COL20A1Q9P218 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 MIR3615-201ENST00000581999 87 ntBASIC17.23■□□□□ 0.35
COL20A1Q9P218 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 REXO1L2P-201ENST00000425429 2069 ntBASIC17.23■□□□□ 0.35
COL20A1Q9P218 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 KRT8P4-201ENST00000509735 1454 ntBASIC17.23■□□□□ 0.35
COL20A1Q9P218 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL20A1Q9P218 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COL20A1Q9P218 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 AC006033.1-201ENST00000440505 426 ntBASIC17.22■□□□□ 0.35
COL20A1Q9P218 CHMP1AP1-201ENST00000445563 662 ntBASIC17.22■□□□□ 0.35
COL20A1Q9P218 HSPB1P2-201ENST00000448722 546 ntBASIC17.22■□□□□ 0.35
COL20A1Q9P218 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms