Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMBRD1Q9NUN5 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 RN7SL589P-201ENST00000481268 310 ntBASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 KRT18P56-201ENST00000507275 550 ntBASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 SLC25A39P2-201ENST00000537614 270 ntBASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 KRT8P23-201ENST00000560090 1207 ntBASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMBRD1Q9NUN5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LMBRD1Q9NUN5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.64■□□□□ 0.42
LMBRD1Q9NUN5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LMBRD1Q9NUN5 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
LMBRD1Q9NUN5 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 CICP20-201ENST00000443330 2801 ntBASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 AC105021.1-202ENST00000570572 669 ntBASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMBRD1Q9NUN5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms