Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 AC007787.1-201ENST00000588095 1583 ntBASIC14.73□□□□□ -0.05
BRF2Q9HAW0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.73□□□□□ -0.05
BRF2Q9HAW0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 BASP1P1-201ENST00000430708 665 ntBASIC14.72□□□□□ -0.05
BRF2Q9HAW0 AL589987.1-201ENST00000453380 819 ntBASIC14.72□□□□□ -0.05
BRF2Q9HAW0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.72□□□□□ -0.05
BRF2Q9HAW0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 MEP1AP4-201ENST00000423244 1087 ntBASIC14.71□□□□□ -0.05
BRF2Q9HAW0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 AL390955.2-201ENST00000603032 514 ntBASIC14.71□□□□□ -0.05
BRF2Q9HAW0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BRF2Q9HAW0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms