Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.06■□□□□ 0.16
SMOQ99835 CR382287.1-201ENST00000623954 586 ntBASIC16.06■□□□□ 0.16
SMOQ99835 COX11-210ENST00000639671 696 ntBASIC16.06■□□□□ 0.16
SMOQ99835 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 AC091951.1-201ENST00000512854 2465 ntBASIC16.06■□□□□ 0.16
SMOQ99835 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SMOQ99835 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.06■□□□□ 0.16
SMOQ99835 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMOQ99835 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.05■□□□□ 0.16
SMOQ99835 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.05■□□□□ 0.16
SMOQ99835 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SMOQ99835 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.05■□□□□ 0.16
SMOQ99835 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.05■□□□□ 0.16
SMOQ99835 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SMOQ99835 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.05■□□□□ 0.16
SMOQ99835 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
SMOQ99835 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SMOQ99835 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.05■□□□□ 0.16
SMOQ99835 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SMOQ99835 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.05■□□□□ 0.16
SMOQ99835 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.05■□□□□ 0.16
SMOQ99835 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
SMOQ99835 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.05■□□□□ 0.16
SMOQ99835 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.05■□□□□ 0.16
SMOQ99835 AP005482.1-201ENST00000563722 1273 ntBASIC16.05■□□□□ 0.16
SMOQ99835 AC132938.4-201ENST00000623835 848 ntBASIC16.05■□□□□ 0.16
SMOQ99835 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.05■□□□□ 0.16
SMOQ99835 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.05■□□□□ 0.16
SMOQ99835 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.05■□□□□ 0.16
SMOQ99835 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.05■□□□□ 0.16
SMOQ99835 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.05■□□□□ 0.16
SMOQ99835 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMOQ99835 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
SMOQ99835 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 AL137783.1-201ENST00000623494 1896 ntBASIC16.04■□□□□ 0.16
SMOQ99835 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.04■□□□□ 0.16
SMOQ99835 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.04■□□□□ 0.16
SMOQ99835 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.04■□□□□ 0.16
SMOQ99835 KRT223P-202ENST00000449164 1292 ntBASIC16.04■□□□□ 0.16
SMOQ99835 AL590640.2-201ENST00000457038 527 ntBASIC16.04■□□□□ 0.16
SMOQ99835 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.04■□□□□ 0.16
SMOQ99835 AC078819.1-201ENST00000547454 765 ntBASIC16.04■□□□□ 0.16
SMOQ99835 AC012085.1-201ENST00000548270 765 ntBASIC16.04■□□□□ 0.16
SMOQ99835 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.04■□□□□ 0.16
SMOQ99835 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.04■□□□□ 0.16
SMOQ99835 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.04■□□□□ 0.16
SMOQ99835 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.04■□□□□ 0.16
SMOQ99835 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMOQ99835 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms